Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Gm45725-201ENSMUST00000212962 337 ntBASIC9.46□□□□□ -0.9
NpcdF8VQB8 AC160338.2-201ENSMUST00000215508 281 ntTSL 5 BASIC9.46□□□□□ -0.9
NpcdF8VQB8 Gm39383-201ENSMUST00000216894 1009 ntTSL 5 BASIC9.46□□□□□ -0.9
NpcdF8VQB8 Gm19161-201ENSMUST00000217958 737 ntBASIC9.46□□□□□ -0.9
NpcdF8VQB8 Gm19169-201ENSMUST00000220109 1246 ntBASIC9.46□□□□□ -0.9
NpcdF8VQB8 4933412O06Rik-201ENSMUST00000222681 1123 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
NpcdF8VQB8 AC118249.1-201ENSMUST00000224822 608 ntBASIC9.46□□□□□ -0.9
NpcdF8VQB8 AC099629.1-201ENSMUST00000226778 464 ntBASIC9.46□□□□□ -0.9
NpcdF8VQB8 AC122459.3-201ENSMUST00000228508 1042 ntBASIC9.46□□□□□ -0.9
NpcdF8VQB8 Olfr266-201ENSMUST00000059486 1027 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
NpcdF8VQB8 Spink12-201ENSMUST00000081271 1007 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
NpcdF8VQB8 Arpp21-203ENSMUST00000111872 3316 ntTSL 5 BASIC9.46□□□□□ -0.9
NpcdF8VQB8 Arpp21-229ENSMUST00000164754 3310 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
NpcdF8VQB8 Nos1-207ENSMUST00000171055 4388 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.9
NpcdF8VQB8 Ppwd1-201ENSMUST00000022226 2342 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
NpcdF8VQB8 Arsj-201ENSMUST00000093976 3859 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
NpcdF8VQB8 Calhm2-202ENSMUST00000140512 3377 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
NpcdF8VQB8 Gm20388-201ENSMUST00000127664 3953 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
NpcdF8VQB8 Gm42759-201ENSMUST00000195915 2439 ntBASIC9.46□□□□□ -0.9
NpcdF8VQB8 C130071C03Rik-201ENSMUST00000131907 3590 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
NpcdF8VQB8 Atxn7l1-210ENSMUST00000144586 3042 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
NpcdF8VQB8 Gm2233-201ENSMUST00000222566 1916 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
NpcdF8VQB8 Zfp248-201ENSMUST00000069292 3683 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
NpcdF8VQB8 Dusp3-202ENSMUST00000107172 4445 ntAPPRIS P1 TSL 3 BASIC9.46□□□□□ -0.9
NpcdF8VQB8 Gm6567-201ENSMUST00000205529 2095 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
NpcdF8VQB8 Olfr92-202ENSMUST00000214994 2073 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
NpcdF8VQB8 Fras1-201ENSMUST00000036019 15848 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
NpcdF8VQB8 Sp1-204ENSMUST00000165924 4081 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.9
NpcdF8VQB8 Pax9-201ENSMUST00000001538 4166 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
NpcdF8VQB8 Luzp1-203ENSMUST00000105849 7438 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
NpcdF8VQB8 Abca1-201ENSMUST00000030010 10262 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
NpcdF8VQB8 Iars-201ENSMUST00000047363 4396 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
NpcdF8VQB8 Pik3ca-203ENSMUST00000108243 6689 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
NpcdF8VQB8 Inpp5d-209ENSMUST00000168783 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
NpcdF8VQB8 Gucy2c-202ENSMUST00000078095 3863 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
NpcdF8VQB8 Pax3-202ENSMUST00000087086 3863 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
NpcdF8VQB8 Prkcz-202ENSMUST00000103178 4083 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
NpcdF8VQB8 Setd5-202ENSMUST00000113155 6362 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
NpcdF8VQB8 4833420G17Rik-203ENSMUST00000224312 3406 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
NpcdF8VQB8 Osbpl1a-202ENSMUST00000117361 2687 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
NpcdF8VQB8 Gm3234-201ENSMUST00000222644 5061 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
NpcdF8VQB8 Sbf2-201ENSMUST00000033058 7154 ntAPPRIS P2 TSL 5 BASIC9.45□□□□□ -0.9
NpcdF8VQB8 Gm5725-201ENSMUST00000105195 924 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
NpcdF8VQB8 Gm12670-201ENSMUST00000123606 576 ntTSL 2 BASIC9.45□□□□□ -0.9
NpcdF8VQB8 4930517O19Rik-201ENSMUST00000140320 603 ntTSL 5 BASIC9.45□□□□□ -0.9
NpcdF8VQB8 Gm7546-201ENSMUST00000146119 966 ntTSL 3 BASIC9.45□□□□□ -0.9
NpcdF8VQB8 Gm24530-201ENSMUST00000157948 288 ntBASIC9.45□□□□□ -0.9
NpcdF8VQB8 Atxn3-205ENSMUST00000161011 1000 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
NpcdF8VQB8 Gm8653-201ENSMUST00000163096 924 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
NpcdF8VQB8 Vmn1r129-201ENSMUST00000165961 924 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
NpcdF8VQB8 Vmn1r117-201ENSMUST00000166937 924 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
NpcdF8VQB8 Gm8720-201ENSMUST00000168392 924 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
NpcdF8VQB8 Gm6164-201ENSMUST00000169774 924 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
NpcdF8VQB8 Gm9047-201ENSMUST00000171317 682 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
NpcdF8VQB8 Obox3-ps4-201ENSMUST00000176026 1005 ntBASIC9.45□□□□□ -0.9
NpcdF8VQB8 Obox4-ps30-201ENSMUST00000176032 948 ntBASIC9.45□□□□□ -0.9
NpcdF8VQB8 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC9.45□□□□□ -0.9
NpcdF8VQB8 Gm5973-201ENSMUST00000178542 496 ntBASIC9.45□□□□□ -0.9
NpcdF8VQB8 Gm21181-201ENSMUST00000186249 330 ntBASIC9.45□□□□□ -0.9
NpcdF8VQB8 Ly6g-202ENSMUST00000190262 941 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
NpcdF8VQB8 Gm4856-201ENSMUST00000192696 1091 ntBASIC9.45□□□□□ -0.9
NpcdF8VQB8 Gm37191-201ENSMUST00000193346 388 ntBASIC9.45□□□□□ -0.9
NpcdF8VQB8 Gm38087-201ENSMUST00000193653 265 ntTSL 5 BASIC9.45□□□□□ -0.9
NpcdF8VQB8 Gm37841-201ENSMUST00000195367 376 ntBASIC9.45□□□□□ -0.9
NpcdF8VQB8 1700051K13Rik-201ENSMUST00000204426 696 ntBASIC9.45□□□□□ -0.9
NpcdF8VQB8 Olfr1468-ps1-201ENSMUST00000207287 1208 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
NpcdF8VQB8 Gm45145-203ENSMUST00000208872 958 ntTSL 5 BASIC9.45□□□□□ -0.9
NpcdF8VQB8 Gm45299-201ENSMUST00000210199 420 ntBASIC9.45□□□□□ -0.9
NpcdF8VQB8 Gm45334-201ENSMUST00000211118 1227 ntTSL 5 BASIC9.45□□□□□ -0.9
NpcdF8VQB8 Olfr928-ps1-201ENSMUST00000213313 237 ntBASIC9.45□□□□□ -0.9
NpcdF8VQB8 Gm29807-201ENSMUST00000220161 372 ntBASIC9.45□□□□□ -0.9
NpcdF8VQB8 AC158536.1-201ENSMUST00000222510 256 ntBASIC9.45□□□□□ -0.9
NpcdF8VQB8 Gm46323-201ENSMUST00000223136 628 ntTSL 5 BASIC9.45□□□□□ -0.9
NpcdF8VQB8 AC238940.2-201ENSMUST00000224202 330 ntBASIC9.45□□□□□ -0.9
NpcdF8VQB8 AC126805.1-201ENSMUST00000225142 262 ntBASIC9.45□□□□□ -0.9
NpcdF8VQB8 Frg1-201ENSMUST00000033999 1039 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
NpcdF8VQB8 Olfr844-201ENSMUST00000054106 930 ntBASIC9.45□□□□□ -0.9
NpcdF8VQB8 Olfr488-201ENSMUST00000072968 945 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
NpcdF8VQB8 Olfr1113-201ENSMUST00000079966 981 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
NpcdF8VQB8 Olfr1132-201ENSMUST00000090711 927 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
NpcdF8VQB8 Gucy1b3-204ENSMUST00000193597 3171 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
NpcdF8VQB8 Zkscan8-201ENSMUST00000045228 8805 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
NpcdF8VQB8 Fam160a1-202ENSMUST00000118408 4445 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
NpcdF8VQB8 Lgals8-207ENSMUST00000143693 2457 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
NpcdF8VQB8 Acod1-201ENSMUST00000022722 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
NpcdF8VQB8 Rai14-207ENSMUST00000227506 4732 ntAPPRIS ALT2 BASIC9.45□□□□□ -0.9
NpcdF8VQB8 Igsf1-203ENSMUST00000114891 1761 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
NpcdF8VQB8 Fbxo9-201ENSMUST00000001402 1850 ntAPPRIS P4 TSL 1 (best) BASIC9.45□□□□□ -0.9
NpcdF8VQB8 Heatr9-201ENSMUST00000019069 1875 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
NpcdF8VQB8 Etl4-203ENSMUST00000114604 4786 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
NpcdF8VQB8 Parva-203ENSMUST00000106643 2222 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
NpcdF8VQB8 Gm45292-201ENSMUST00000211232 2207 ntBASIC9.44□□□□□ -0.9
NpcdF8VQB8 Gm26920-201ENSMUST00000182746 2374 ntAPPRIS P1 TSL 2 BASIC9.44□□□□□ -0.9
NpcdF8VQB8 Smarca1-203ENSMUST00000101616 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
NpcdF8VQB8 Pofut1-206ENSMUST00000123487 4143 ntTSL 2 BASIC9.44□□□□□ -0.9
NpcdF8VQB8 Satb1-213ENSMUST00000169480 6194 ntAPPRIS P2 TSL 5 BASIC9.44□□□□□ -0.9
NpcdF8VQB8 4932415M13Rik-202ENSMUST00000184645 3063 ntTSL 2 BASIC9.44□□□□□ -0.9
NpcdF8VQB8 Cntn2-201ENSMUST00000086521 7177 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
NpcdF8VQB8 Wdr59-203ENSMUST00000211981 3618 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
NpcdF8VQB8 Ifna16-201ENSMUST00000105148 1010 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 73.4 ms