Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Gpm6b-202ENSMUST00000112223 4764 ntAPPRIS ALT1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Chmp4bQ9D8B3 Armc8-203ENSMUST00000186049 2761 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Chmp4bQ9D8B3 Magea5-202ENSMUST00000169540 1563 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Chmp4bQ9D8B3 Ccdc82-206ENSMUST00000217444 4736 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Chmp4bQ9D8B3 Kank4os-201ENSMUST00000133455 2251 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Chmp4bQ9D8B3 Olfr285-202ENSMUST00000216901 5330 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Chmp4bQ9D8B3 Pfkfb3-214ENSMUST00000179584 4756 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Chmp4bQ9D8B3 Afap1l2-203ENSMUST00000122359 3667 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Chmp4bQ9D8B3 Gm14035-201ENSMUST00000117596 1475 ntBASIC9.53□□□□□ -0.88
Chmp4bQ9D8B3 4930524O08Rik-201ENSMUST00000183387 1451 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Chmp4bQ9D8B3 Nr5a2-201ENSMUST00000027649 4733 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Chmp4bQ9D8B3 Dbhos-201ENSMUST00000150024 4020 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Chmp4bQ9D8B3 Cabyr-207ENSMUST00000191078 1642 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Chmp4bQ9D8B3 Gm42771-201ENSMUST00000198342 2486 ntBASIC9.53□□□□□ -0.88
Chmp4bQ9D8B3 Gm43571-201ENSMUST00000200067 3098 ntBASIC9.52□□□□□ -0.88
Chmp4bQ9D8B3 Gm34777-201ENSMUST00000219688 2505 ntTSL 5 BASIC9.52□□□□□ -0.88
Chmp4bQ9D8B3 Gm44116-201ENSMUST00000204269 1525 ntBASIC9.52□□□□□ -0.88
Chmp4bQ9D8B3 Lix1-201ENSMUST00000115576 3116 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Chmp4bQ9D8B3 Gm26849-201ENSMUST00000180561 1842 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Chmp4bQ9D8B3 Tssk1-201ENSMUST00000046937 3700 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Chmp4bQ9D8B3 Med12l-204ENSMUST00000164225 10264 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Chmp4bQ9D8B3 Lrrc51-206ENSMUST00000106966 821 ntAPPRIS P1 TSL 2 BASIC9.52□□□□□ -0.89
Chmp4bQ9D8B3 Gm12365-201ENSMUST00000117931 568 ntBASIC9.52□□□□□ -0.89
Chmp4bQ9D8B3 Pbdc1-202ENSMUST00000119477 1239 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Chmp4bQ9D8B3 Gm12817-201ENSMUST00000119622 610 ntBASIC9.52□□□□□ -0.89
Chmp4bQ9D8B3 Gm16523-201ENSMUST00000121253 592 ntBASIC9.52□□□□□ -0.89
Chmp4bQ9D8B3 Gm25845-201ENSMUST00000122588 310 ntBASIC9.52□□□□□ -0.89
Chmp4bQ9D8B3 Gm15345-201ENSMUST00000128240 663 ntTSL 3 BASIC9.52□□□□□ -0.89
Chmp4bQ9D8B3 Gm11491-201ENSMUST00000129441 1118 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Chmp4bQ9D8B3 Gm11695-201ENSMUST00000144230 407 ntTSL 2 BASIC9.52□□□□□ -0.89
Chmp4bQ9D8B3 Gm10804-202ENSMUST00000162565 867 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Chmp4bQ9D8B3 Ankrd55-204ENSMUST00000168684 1005 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Chmp4bQ9D8B3 Rpain-211ENSMUST00000169965 343 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Chmp4bQ9D8B3 Gm25082-201ENSMUST00000177296 255 ntBASIC9.52□□□□□ -0.89
Chmp4bQ9D8B3 Gm5445-201ENSMUST00000180224 480 ntBASIC9.52□□□□□ -0.89
Chmp4bQ9D8B3 Gm20587-201ENSMUST00000186367 1186 ntBASIC9.52□□□□□ -0.89
Chmp4bQ9D8B3 Gm37825-201ENSMUST00000193141 904 ntTSL 5 BASIC9.52□□□□□ -0.89
Chmp4bQ9D8B3 Gm37612-201ENSMUST00000193626 582 ntTSL 5 BASIC9.52□□□□□ -0.89
Chmp4bQ9D8B3 Gm42538-201ENSMUST00000196233 566 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Chmp4bQ9D8B3 A230001M10Rik-203ENSMUST00000198712 1747 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Chmp4bQ9D8B3 Gm40853-201ENSMUST00000221342 582 ntBASIC9.52□□□□□ -0.89
Chmp4bQ9D8B3 Gm9255-201ENSMUST00000223225 581 ntBASIC9.52□□□□□ -0.89
Chmp4bQ9D8B3 Cthrc1-204ENSMUST00000226433 596 ntBASIC9.52□□□□□ -0.89
Chmp4bQ9D8B3 AC122309.1-201ENSMUST00000226945 421 ntBASIC9.52□□□□□ -0.89
Chmp4bQ9D8B3 Kcnab1-201ENSMUST00000049230 3245 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Chmp4bQ9D8B3 Mir135b-201ENSMUST00000083501 97 ntBASIC9.52□□□□□ -0.89
Chmp4bQ9D8B3 Gm10743-201ENSMUST00000219611 2358 ntBASIC9.52□□□□□ -0.89
Chmp4bQ9D8B3 CT009696.4-202ENSMUST00000213560 2248 ntTSL 5 BASIC9.52□□□□□ -0.89
Chmp4bQ9D8B3 Ttll4-202ENSMUST00000113678 3762 ntTSL 5 BASIC9.52□□□□□ -0.89
Chmp4bQ9D8B3 Gm36823-203ENSMUST00000199408 1792 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Chmp4bQ9D8B3 Gm6729-201ENSMUST00000165173 1452 ntBASIC9.52□□□□□ -0.89
Chmp4bQ9D8B3 Fmr1-204ENSMUST00000114655 4199 ntAPPRIS P5 TSL 5 BASIC9.52□□□□□ -0.89
Chmp4bQ9D8B3 Oxtr-202ENSMUST00000204027 3721 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Chmp4bQ9D8B3 Vmn1r197-202ENSMUST00000226225 5326 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Chmp4bQ9D8B3 Stambpl1-202ENSMUST00000119603 1664 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Chmp4bQ9D8B3 Slc1a3-201ENSMUST00000005493 4163 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Chmp4bQ9D8B3 Serpina3a-203ENSMUST00000185595 1720 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Chmp4bQ9D8B3 Msantd4-201ENSMUST00000047173 2731 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Chmp4bQ9D8B3 Gm2654-201ENSMUST00000221381 1592 ntBASIC9.51□□□□□ -0.89
Chmp4bQ9D8B3 Ctxn3-201ENSMUST00000091892 1441 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Chmp4bQ9D8B3 Olfr15-202ENSMUST00000214238 6135 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Chmp4bQ9D8B3 2610028E06Rik-205ENSMUST00000156350 3623 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Chmp4bQ9D8B3 Igkv8-21-201ENSMUST00000103387 382 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Chmp4bQ9D8B3 Gmfg-202ENSMUST00000108289 477 ntTSL 3 BASIC9.51□□□□□ -0.89
Chmp4bQ9D8B3 Gm12632-201ENSMUST00000121223 495 ntBASIC9.51□□□□□ -0.89
Chmp4bQ9D8B3 Gm14749-201ENSMUST00000121269 333 ntBASIC9.51□□□□□ -0.89
Chmp4bQ9D8B3 Defa-ps16-201ENSMUST00000121939 171 ntBASIC9.51□□□□□ -0.89
Chmp4bQ9D8B3 Gm23007-201ENSMUST00000158951 177 ntBASIC9.51□□□□□ -0.89
Chmp4bQ9D8B3 Gm25692-201ENSMUST00000175444 125 ntBASIC9.51□□□□□ -0.89
Chmp4bQ9D8B3 Gm7763-201ENSMUST00000182220 1006 ntBASIC9.51□□□□□ -0.89
Chmp4bQ9D8B3 Mir8097-201ENSMUST00000185150 119 ntBASIC9.51□□□□□ -0.89
Chmp4bQ9D8B3 Gm7436-201ENSMUST00000187229 391 ntBASIC9.51□□□□□ -0.89
Chmp4bQ9D8B3 Gm37506-201ENSMUST00000192008 143 ntBASIC9.51□□□□□ -0.89
Chmp4bQ9D8B3 Gm37481-201ENSMUST00000195176 403 ntBASIC9.51□□□□□ -0.89
Chmp4bQ9D8B3 Gm42977-201ENSMUST00000197497 144 ntBASIC9.51□□□□□ -0.89
Chmp4bQ9D8B3 Tex26-207ENSMUST00000202920 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Chmp4bQ9D8B3 AC163038.4-201ENSMUST00000224942 474 ntBASIC9.51□□□□□ -0.89
Chmp4bQ9D8B3 Mgat4d-201ENSMUST00000038692 1293 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Chmp4bQ9D8B3 Mkl2-204ENSMUST00000149359 8295 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Chmp4bQ9D8B3 Bcl2l11-203ENSMUST00000103210 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Chmp4bQ9D8B3 Gm9403-201ENSMUST00000196299 2181 ntBASIC9.51□□□□□ -0.89
Chmp4bQ9D8B3 Ide-201ENSMUST00000131070 4962 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Chmp4bQ9D8B3 Ncapg-201ENSMUST00000117396 3703 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Chmp4bQ9D8B3 Phf3-205ENSMUST00000186733 7567 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Chmp4bQ9D8B3 Mrpl1-202ENSMUST00000117766 3556 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Chmp4bQ9D8B3 Pde4b-204ENSMUST00000106901 2129 ntTSL 2 BASIC9.5□□□□□ -0.89
Chmp4bQ9D8B3 Usp40-204ENSMUST00000187758 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Chmp4bQ9D8B3 Senp1-201ENSMUST00000044189 6575 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Chmp4bQ9D8B3 Klf5-202ENSMUST00000226784 2852 ntBASIC9.5□□□□□ -0.89
Chmp4bQ9D8B3 Ankef1-210ENSMUST00000180246 2726 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Chmp4bQ9D8B3 Dst-209ENSMUST00000182697 2704 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Chmp4bQ9D8B3 Olfr221-201ENSMUST00000052560 2741 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Chmp4bQ9D8B3 Npr3-204ENSMUST00000228489 1969 ntBASIC9.5□□□□□ -0.89
Chmp4bQ9D8B3 Gm18957-201ENSMUST00000197623 1813 ntBASIC9.5□□□□□ -0.89
Chmp4bQ9D8B3 Gatad2b-203ENSMUST00000197988 1815 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Chmp4bQ9D8B3 Zfp938-201ENSMUST00000041264 2035 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Chmp4bQ9D8B3 Gm13915-201ENSMUST00000119314 931 ntBASIC9.5□□□□□ -0.89
Chmp4bQ9D8B3 Gm11203-201ENSMUST00000122169 741 ntBASIC9.5□□□□□ -0.89
Chmp4bQ9D8B3 Gm15092-201ENSMUST00000138467 574 ntTSL 5 BASIC9.5□□□□□ -0.89
Chmp4bQ9D8B3 4933427D06Rik-202ENSMUST00000153517 522 ntTSL 5 BASIC9.5□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 72.3 ms