Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Gm16523-201ENSMUST00000121253 592 ntBASIC6.02□□□□□ -1.45
Nup35Q8R4R6 Gm13536-201ENSMUST00000132913 766 ntTSL 2 BASIC6.02□□□□□ -1.45
Nup35Q8R4R6 Gm14040-201ENSMUST00000139058 697 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Nup35Q8R4R6 Apela-202ENSMUST00000142822 975 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Nup35Q8R4R6 E130215H24Rik-201ENSMUST00000145525 939 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Nup35Q8R4R6 Gm16015-201ENSMUST00000154897 390 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Nup35Q8R4R6 Gm22388-201ENSMUST00000158194 248 ntBASIC6.02□□□□□ -1.45
Nup35Q8R4R6 Zwint-204ENSMUST00000160337 1138 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Nup35Q8R4R6 Gm20529-201ENSMUST00000173683 203 ntTSL 5 BASIC6.02□□□□□ -1.45
Nup35Q8R4R6 Gm20406-201ENSMUST00000173993 423 ntTSL 3 BASIC6.02□□□□□ -1.45
Nup35Q8R4R6 Gm20694-201ENSMUST00000176943 404 ntBASIC6.02□□□□□ -1.45
Nup35Q8R4R6 Gm29050-202ENSMUST00000190865 502 ntTSL 2 BASIC6.02□□□□□ -1.45
Nup35Q8R4R6 Gm29462-201ENSMUST00000191458 288 ntBASIC6.02□□□□□ -1.45
Nup35Q8R4R6 Gm38289-201ENSMUST00000194273 597 ntTSL 5 BASIC6.02□□□□□ -1.45
Nup35Q8R4R6 1700008B11Rik-201ENSMUST00000198145 634 ntBASIC6.02□□□□□ -1.45
Nup35Q8R4R6 Gm42424-201ENSMUST00000198319 376 ntBASIC6.02□□□□□ -1.45
Nup35Q8R4R6 Spink8-202ENSMUST00000198988 768 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Nup35Q8R4R6 Pafah1b1-ps2-201ENSMUST00000207209 1223 ntBASIC6.02□□□□□ -1.45
Nup35Q8R4R6 E230029C05Rik-204ENSMUST00000208266 875 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Nup35Q8R4R6 Gm34474-201ENSMUST00000209645 356 ntTSL 5 BASIC6.02□□□□□ -1.45
Nup35Q8R4R6 Gm5086-203ENSMUST00000210897 1136 ntTSL 5 BASIC6.02□□□□□ -1.45
Nup35Q8R4R6 AC130829.2-201ENSMUST00000222931 127 ntBASIC6.02□□□□□ -1.45
Nup35Q8R4R6 AC118249.1-201ENSMUST00000224822 608 ntBASIC6.02□□□□□ -1.45
Nup35Q8R4R6 AC160109.1-201ENSMUST00000225592 729 ntBASIC6.02□□□□□ -1.45
Nup35Q8R4R6 Gm7086-202ENSMUST00000228849 506 ntBASIC6.02□□□□□ -1.45
Nup35Q8R4R6 Fgf21-201ENSMUST00000033099 951 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Nup35Q8R4R6 Rps6-ps2-201ENSMUST00000079841 747 ntBASIC6.02□□□□□ -1.45
Nup35Q8R4R6 Reg1-201ENSMUST00000079926 769 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Nup35Q8R4R6 Gm25129-201ENSMUST00000082651 133 ntBASIC6.02□□□□□ -1.45
Nup35Q8R4R6 6330409D20Rik-201ENSMUST00000009695 1119 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Nup35Q8R4R6 Olfr1226-201ENSMUST00000099790 933 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Nup35Q8R4R6 Gbp3-202ENSMUST00000106221 2682 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Nup35Q8R4R6 Alg11-202ENSMUST00000110737 4833 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Nup35Q8R4R6 Pde1c-202ENSMUST00000114327 6821 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Nup35Q8R4R6 Rps15a-204ENSMUST00000131374 5179 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Nup35Q8R4R6 AC122356.1-202ENSMUST00000227328 2758 ntBASIC6.02□□□□□ -1.45
Nup35Q8R4R6 Hcrtr2-201ENSMUST00000063140 3761 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Nup35Q8R4R6 Rapgef4os3-201ENSMUST00000132792 3485 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Nup35Q8R4R6 Gm10466-201ENSMUST00000101450 2466 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Nup35Q8R4R6 Mak-206ENSMUST00000225084 3573 ntAPPRIS ALT2 BASIC6.02□□□□□ -1.45
Nup35Q8R4R6 Morc1-201ENSMUST00000023330 3050 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Nup35Q8R4R6 Wac-202ENSMUST00000092112 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Nup35Q8R4R6 Gm44436-201ENSMUST00000204200 1494 ntBASIC6.02□□□□□ -1.45
Nup35Q8R4R6 Gm42546-201ENSMUST00000201584 2592 ntBASIC6.02□□□□□ -1.45
Nup35Q8R4R6 Irgm2-203ENSMUST00000209079 3528 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.45
Nup35Q8R4R6 Ptprg-202ENSMUST00000119888 2787 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Nup35Q8R4R6 Glrb-206ENSMUST00000194085 1341 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Nup35Q8R4R6 Kat6a-201ENSMUST00000044331 9113 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Nup35Q8R4R6 Pum2-216ENSMUST00000178015 5874 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
Nup35Q8R4R6 AC124421.1-201ENSMUST00000219114 4154 ntBASIC6.01□□□□□ -1.45
Nup35Q8R4R6 Gm44228-201ENSMUST00000204888 2026 ntBASIC6.01□□□□□ -1.45
Nup35Q8R4R6 Gm45887-201ENSMUST00000212672 2998 ntBASIC6.01□□□□□ -1.45
Nup35Q8R4R6 Gm16072-201ENSMUST00000119574 2377 ntBASIC6.01□□□□□ -1.45
Nup35Q8R4R6 1700095J07Rik-201ENSMUST00000128017 1405 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Nup35Q8R4R6 Tex52-202ENSMUST00000130785 1424 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Nup35Q8R4R6 Scaper-201ENSMUST00000037408 5158 ntAPPRIS P2 TSL 5 BASIC6.01□□□□□ -1.45
Nup35Q8R4R6 Gm42885-201ENSMUST00000200763 4214 ntBASIC6.01□□□□□ -1.45
Nup35Q8R4R6 Ubxn7-201ENSMUST00000115151 10318 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Nup35Q8R4R6 Gm11934-201ENSMUST00000132553 1536 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Nup35Q8R4R6 Prkacb-203ENSMUST00000106137 4061 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Nup35Q8R4R6 Zfp37-204ENSMUST00000220873 1985 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
Nup35Q8R4R6 Ighv1-56-201ENSMUST00000103527 294 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Nup35Q8R4R6 Gm22438-201ENSMUST00000104049 132 ntBASIC6.01□□□□□ -1.45
Nup35Q8R4R6 n-R5s72-201ENSMUST00000104518 119 ntBASIC6.01□□□□□ -1.45
Nup35Q8R4R6 Mobp-203ENSMUST00000111627 481 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
Nup35Q8R4R6 Gm14509-201ENSMUST00000117312 1286 ntBASIC6.01□□□□□ -1.45
Nup35Q8R4R6 Gm12604-201ENSMUST00000118382 380 ntBASIC6.01□□□□□ -1.45
Nup35Q8R4R6 Gm11245-201ENSMUST00000119419 1037 ntBASIC6.01□□□□□ -1.45
Nup35Q8R4R6 Rps18-ps1-201ENSMUST00000120838 459 ntBASIC6.01□□□□□ -1.45
Nup35Q8R4R6 Bambi-ps1-201ENSMUST00000121525 592 ntBASIC6.01□□□□□ -1.45
Nup35Q8R4R6 Gm12920-201ENSMUST00000121818 1186 ntBASIC6.01□□□□□ -1.45
Nup35Q8R4R6 Gm24039-201ENSMUST00000157878 132 ntBASIC6.01□□□□□ -1.45
Nup35Q8R4R6 Gm8529-201ENSMUST00000183298 745 ntBASIC6.01□□□□□ -1.45
Nup35Q8R4R6 1700021A07Rik-202ENSMUST00000187763 485 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Nup35Q8R4R6 1700016D06Rik-202ENSMUST00000190741 604 ntTSL 2 BASIC6.01□□□□□ -1.45
Nup35Q8R4R6 Gm29739-201ENSMUST00000191760 529 ntBASIC6.01□□□□□ -1.45
Nup35Q8R4R6 Gm37349-201ENSMUST00000194205 624 ntBASIC6.01□□□□□ -1.45
Nup35Q8R4R6 Gm30275-201ENSMUST00000197620 498 ntTSL 2 BASIC6.01□□□□□ -1.45
Nup35Q8R4R6 Gm19254-201ENSMUST00000204828 294 ntBASIC6.01□□□□□ -1.45
Nup35Q8R4R6 Gm9240-201ENSMUST00000206527 742 ntBASIC6.01□□□□□ -1.45
Nup35Q8R4R6 Gm45024-201ENSMUST00000208274 623 ntTSL 3 BASIC6.01□□□□□ -1.45
Nup35Q8R4R6 Gm45255-201ENSMUST00000209943 811 ntBASIC6.01□□□□□ -1.45
Nup35Q8R4R6 Gm34006-201ENSMUST00000213985 655 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Nup35Q8R4R6 Gm39456-201ENSMUST00000214759 1019 ntTSL 5 BASIC6.01□□□□□ -1.45
Nup35Q8R4R6 CT009738.1-201ENSMUST00000219031 809 ntBASIC6.01□□□□□ -1.45
Nup35Q8R4R6 AC164978.2-201ENSMUST00000226645 857 ntBASIC6.01□□□□□ -1.45
Nup35Q8R4R6 AC154627.1-201ENSMUST00000228799 1286 ntBASIC6.01□□□□□ -1.45
Nup35Q8R4R6 Olfr735-201ENSMUST00000049729 1065 ntAPPRIS P2 BASIC6.01□□□□□ -1.45
Nup35Q8R4R6 Prss58-201ENSMUST00000063523 979 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Nup35Q8R4R6 Olfr890-201ENSMUST00000079804 945 ntBASIC6.01□□□□□ -1.45
Nup35Q8R4R6 Slc22a8-201ENSMUST00000010251 3478 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Nup35Q8R4R6 Arhgef12-201ENSMUST00000072767 10059 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Nup35Q8R4R6 Gm37043-201ENSMUST00000194609 3105 ntBASIC6.01□□□□□ -1.45
Nup35Q8R4R6 Fmn1-209ENSMUST00000161731 4262 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Nup35Q8R4R6 Focad-201ENSMUST00000097992 5791 ntAPPRIS P2 TSL 5 BASIC6.01□□□□□ -1.45
Nup35Q8R4R6 Wdr64-203ENSMUST00000194087 3225 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
Nup35Q8R4R6 Sprr2a3-202ENSMUST00000193337 2880 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Nup35Q8R4R6 Samd3-206ENSMUST00000220219 1744 ntAPPRIS P4 TSL 5 BASIC6.01□□□□□ -1.45
Nup35Q8R4R6 4933425L06Rik-201ENSMUST00000022232 2157 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Nup35Q8R4R6 Itih5-201ENSMUST00000026886 7900 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 71.5 ms