Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 1700021A07Rik-202ENSMUST00000187763 485 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Clrn1Q8K445 Gm29126-201ENSMUST00000188686 151 ntBASIC7.29□□□□□ -1.24
Clrn1Q8K445 Gm28264-201ENSMUST00000190657 398 ntTSL 5 BASIC7.29□□□□□ -1.24
Clrn1Q8K445 Gm29250-201ENSMUST00000191372 368 ntTSL 5 BASIC7.29□□□□□ -1.24
Clrn1Q8K445 Gm36994-201ENSMUST00000192941 492 ntBASIC7.29□□□□□ -1.24
Clrn1Q8K445 Gm44427-201ENSMUST00000204123 456 ntTSL 3 BASIC7.29□□□□□ -1.24
Clrn1Q8K445 Gm4977-201ENSMUST00000215709 1262 ntBASIC7.29□□□□□ -1.24
Clrn1Q8K445 Gm5655-201ENSMUST00000221078 901 ntBASIC7.29□□□□□ -1.24
Clrn1Q8K445 Olfr1441-201ENSMUST00000059033 1088 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
Clrn1Q8K445 Gstm2-202ENSMUST00000066530 854 ntTSL 3 BASIC7.29□□□□□ -1.24
Clrn1Q8K445 Gm10123-201ENSMUST00000075723 490 ntBASIC7.29□□□□□ -1.24
Clrn1Q8K445 Ighv1-13-201ENSMUST00000095364 294 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
Clrn1Q8K445 Olfr619-201ENSMUST00000098196 1124 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
Clrn1Q8K445 Olfr1098-201ENSMUST00000099872 948 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
Clrn1Q8K445 Clasp1-204ENSMUST00000178710 7566 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
Clrn1Q8K445 Armcx3-201ENSMUST00000081834 3327 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Clrn1Q8K445 Vmn2r-ps82-201ENSMUST00000174222 1641 ntBASIC7.29□□□□□ -1.24
Clrn1Q8K445 Prcp-202ENSMUST00000207594 2245 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Clrn1Q8K445 Ofcc1-201ENSMUST00000054635 2816 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Clrn1Q8K445 Phf11a-201ENSMUST00000062307 1354 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Clrn1Q8K445 Kbtbd3-202ENSMUST00000212221 2313 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Clrn1Q8K445 4930528G23Rik-201ENSMUST00000124575 1723 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Clrn1Q8K445 Cntn5-204ENSMUST00000162484 3606 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Clrn1Q8K445 Epb41l2-219ENSMUST00000220290 4345 ntTSL 5 BASIC7.29□□□□□ -1.24
Clrn1Q8K445 Cops2-203ENSMUST00000110463 3392 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Clrn1Q8K445 Zfp317-201ENSMUST00000079042 1824 ntAPPRIS P1 TSL 2 BASIC7.29□□□□□ -1.24
Clrn1Q8K445 Lsmem1-202ENSMUST00000220951 2152 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Clrn1Q8K445 Pdzd9-201ENSMUST00000033178 2180 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Clrn1Q8K445 Vmn1r196-202ENSMUST00000226245 5312 ntAPPRIS ALT2 BASIC7.29□□□□□ -1.24
Clrn1Q8K445 Gm26656-201ENSMUST00000181825 2972 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Clrn1Q8K445 C87499-201ENSMUST00000053304 1901 ntAPPRIS P2 TSL 1 (best) BASIC7.29□□□□□ -1.24
Clrn1Q8K445 Dppa2-201ENSMUST00000097175 1948 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Clrn1Q8K445 Fam83b-202ENSMUST00000183437 3879 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Clrn1Q8K445 Edar-201ENSMUST00000003312 3637 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Clrn1Q8K445 AC105958.1-201ENSMUST00000214783 2144 ntBASIC7.28□□□□□ -1.24
Clrn1Q8K445 B3gnt5-207ENSMUST00000164397 4872 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
Clrn1Q8K445 Kbtbd8-201ENSMUST00000032107 4869 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Clrn1Q8K445 Cnep1r1-203ENSMUST00000121097 2209 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Clrn1Q8K445 Gm5118-201ENSMUST00000184692 2203 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Clrn1Q8K445 C130093G08Rik-201ENSMUST00000202489 2226 ntBASIC7.28□□□□□ -1.24
Clrn1Q8K445 Gimd1-201ENSMUST00000163241 1413 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
Clrn1Q8K445 Fblim1-201ENSMUST00000006381 3101 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Clrn1Q8K445 E430024I08Rik-202ENSMUST00000220632 1513 ntTSL 5 BASIC7.28□□□□□ -1.24
Clrn1Q8K445 Gm38315-201ENSMUST00000194286 2437 ntBASIC7.28□□□□□ -1.24
Clrn1Q8K445 Etv5-203ENSMUST00000168774 3773 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Clrn1Q8K445 Acad11-201ENSMUST00000047799 3444 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Clrn1Q8K445 Tmem175-201ENSMUST00000063272 3956 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Clrn1Q8K445 Gm20815-201ENSMUST00000115496 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Clrn1Q8K445 Anp32-ps-201ENSMUST00000118265 388 ntBASIC7.28□□□□□ -1.24
Clrn1Q8K445 Gm4918-201ENSMUST00000119420 1084 ntBASIC7.28□□□□□ -1.24
Clrn1Q8K445 Gm14824-201ENSMUST00000119421 737 ntBASIC7.28□□□□□ -1.24
Clrn1Q8K445 Gm14525-201ENSMUST00000119649 893 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Clrn1Q8K445 Vmn1r-ps103-201ENSMUST00000120171 893 ntBASIC7.28□□□□□ -1.24
Clrn1Q8K445 Anp32b-ps1-201ENSMUST00000122215 758 ntBASIC7.28□□□□□ -1.24
Clrn1Q8K445 Gm1947-201ENSMUST00000122451 910 ntBASIC7.28□□□□□ -1.24
Clrn1Q8K445 Gm25780-201ENSMUST00000122528 253 ntBASIC7.28□□□□□ -1.24
Clrn1Q8K445 Gm15339-201ENSMUST00000153577 506 ntTSL 3 BASIC7.28□□□□□ -1.24
Clrn1Q8K445 Olfr721-ps1-201ENSMUST00000165291 975 ntBASIC7.28□□□□□ -1.24
Clrn1Q8K445 Spp2-202ENSMUST00000176708 710 ntTSL 2 BASIC7.28□□□□□ -1.24
Clrn1Q8K445 1700015G11Rik-201ENSMUST00000180038 397 ntAPPRIS P2 TSL 1 (best) BASIC7.28□□□□□ -1.24
Clrn1Q8K445 BE692007-201ENSMUST00000186054 954 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Clrn1Q8K445 Gm21812-202ENSMUST00000188908 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Clrn1Q8K445 Gm18799-201ENSMUST00000189104 913 ntBASIC7.28□□□□□ -1.24
Clrn1Q8K445 Gm18183-201ENSMUST00000191024 615 ntBASIC7.28□□□□□ -1.24
Clrn1Q8K445 Gm19124-201ENSMUST00000191041 832 ntBASIC7.28□□□□□ -1.24
Clrn1Q8K445 Gm29739-201ENSMUST00000191760 529 ntBASIC7.28□□□□□ -1.24
Clrn1Q8K445 Gm37336-201ENSMUST00000192794 760 ntTSL 2 BASIC7.28□□□□□ -1.24
Clrn1Q8K445 Gm38164-201ENSMUST00000192810 330 ntBASIC7.28□□□□□ -1.24
Clrn1Q8K445 Scp2-ps1-201ENSMUST00000193152 499 ntBASIC7.28□□□□□ -1.24
Clrn1Q8K445 Gm44287-201ENSMUST00000203069 290 ntTSL 3 BASIC7.28□□□□□ -1.24
Clrn1Q8K445 Olfr320-201ENSMUST00000204718 928 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
Clrn1Q8K445 A930014E10Rik-201ENSMUST00000205115 546 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Clrn1Q8K445 Gm32884-201ENSMUST00000205528 732 ntTSL 5 BASIC7.28□□□□□ -1.24
Clrn1Q8K445 Gm45202-201ENSMUST00000205955 332 ntTSL 3 BASIC7.28□□□□□ -1.24
Clrn1Q8K445 Gm18060-201ENSMUST00000207407 564 ntBASIC7.28□□□□□ -1.24
Clrn1Q8K445 Gm45259-201ENSMUST00000209217 1006 ntBASIC7.28□□□□□ -1.24
Clrn1Q8K445 4930483O08Rik-201ENSMUST00000209850 1030 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Clrn1Q8K445 Olfr27-201ENSMUST00000214052 1076 ntAPPRIS P1 TSL 3 BASIC7.28□□□□□ -1.24
Clrn1Q8K445 RMST_1.1-204ENSMUST00000217871 699 ntTSL 5 BASIC7.28□□□□□ -1.24
Clrn1Q8K445 AC147615.1-201ENSMUST00000218914 441 ntBASIC7.28□□□□□ -1.24
Clrn1Q8K445 AC133189.3-201ENSMUST00000226269 878 ntBASIC7.28□□□□□ -1.24
Clrn1Q8K445 AC154760.1-201ENSMUST00000227218 673 ntBASIC7.28□□□□□ -1.24
Clrn1Q8K445 AC116724.1-201ENSMUST00000227900 972 ntBASIC7.28□□□□□ -1.24
Clrn1Q8K445 Gm9837-201ENSMUST00000057722 731 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
Clrn1Q8K445 Olfr402-201ENSMUST00000073675 1012 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
Clrn1Q8K445 Boll-201ENSMUST00000087585 882 ntAPPRIS P2 TSL 1 (best) BASIC7.28□□□□□ -1.24
Clrn1Q8K445 Gm10697-201ENSMUST00000091692 1023 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
Clrn1Q8K445 Tdpoz5-201ENSMUST00000098879 1023 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
Clrn1Q8K445 Tpd52l2-204ENSMUST00000108800 3475 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Clrn1Q8K445 Ldhc-201ENSMUST00000014545 1370 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Clrn1Q8K445 Gm37965-201ENSMUST00000195304 1362 ntBASIC7.28□□□□□ -1.24
Clrn1Q8K445 Olfr1428-202ENSMUST00000208391 1368 ntTSL 3 BASIC7.28□□□□□ -1.24
Clrn1Q8K445 Cyp19a1-203ENSMUST00000215736 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
Clrn1Q8K445 Ivd-201ENSMUST00000028807 3665 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Clrn1Q8K445 Lyg2-201ENSMUST00000078307 2564 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Clrn1Q8K445 Zfp846-202ENSMUST00000115557 12974 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Clrn1Q8K445 Adgrg7-201ENSMUST00000023437 2698 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Clrn1Q8K445 Etv1-201ENSMUST00000095767 6576 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Clrn1Q8K445 Vmn1r4-202ENSMUST00000176838 2235 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Clrn1Q8K445 Gm34653-201ENSMUST00000201786 1658 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms