Protein–RNA interactions for Protein: Q6VGS5

Ccdc88c, Protein Daple, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88cQ6VGS5 4933406J09Rik-201ENSMUST00000203352 1505 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Ccdc88cQ6VGS5 Pfkfb2-203ENSMUST00000169659 2849 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
Ccdc88cQ6VGS5 Srrm1-201ENSMUST00000030613 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.08
Ccdc88cQ6VGS5 9030624J02Rik-201ENSMUST00000033280 2934 ntTSL 1 (best) BASIC8.27□□□□□ -1.08
Ccdc88cQ6VGS5 Pnliprp1-201ENSMUST00000048644 1619 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
Ccdc88cQ6VGS5 Olfr224-203ENSMUST00000216758 1742 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.08
Ccdc88cQ6VGS5 Gbp7-202ENSMUST00000171263 2497 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
Ccdc88cQ6VGS5 Slfn4-202ENSMUST00000167596 3703 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
Ccdc88cQ6VGS5 Gm22915-201ENSMUST00000157615 136 ntBASIC8.27□□□□□ -1.09
Ccdc88cQ6VGS5 Mir1930-201ENSMUST00000158799 84 ntBASIC8.27□□□□□ -1.09
Ccdc88cQ6VGS5 Gm24300-201ENSMUST00000177809 109 ntBASIC8.27□□□□□ -1.09
Ccdc88cQ6VGS5 Gm24017-201ENSMUST00000178726 109 ntBASIC8.27□□□□□ -1.09
Ccdc88cQ6VGS5 Gm23952-201ENSMUST00000179380 109 ntBASIC8.27□□□□□ -1.09
Ccdc88cQ6VGS5 Gm36932-201ENSMUST00000195226 929 ntBASIC8.27□□□□□ -1.09
Ccdc88cQ6VGS5 Fabp7-201ENSMUST00000020024 804 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Ccdc88cQ6VGS5 Gm44692-201ENSMUST00000207441 901 ntTSL 3 BASIC8.27□□□□□ -1.09
Ccdc88cQ6VGS5 Gm44621-201ENSMUST00000207643 1166 ntTSL 3 BASIC8.27□□□□□ -1.09
Ccdc88cQ6VGS5 Olfr882-ps1-201ENSMUST00000211842 450 ntBASIC8.27□□□□□ -1.09
Ccdc88cQ6VGS5 Gm30132-202ENSMUST00000212825 819 ntTSL 3 BASIC8.27□□□□□ -1.09
Ccdc88cQ6VGS5 Gm46311-201ENSMUST00000217971 203 ntBASIC8.27□□□□□ -1.09
Ccdc88cQ6VGS5 3300002A11Rik-201ENSMUST00000046994 654 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Ccdc88cQ6VGS5 Gm13769-201ENSMUST00000077123 930 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
Ccdc88cQ6VGS5 n-R5s60-201ENSMUST00000083299 119 ntBASIC8.27□□□□□ -1.09
Ccdc88cQ6VGS5 Ube2c-202ENSMUST00000088248 967 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Ccdc88cQ6VGS5 Cd163-202ENSMUST00000112541 4443 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Ccdc88cQ6VGS5 Slc4a4-208ENSMUST00000156238 3494 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
Ccdc88cQ6VGS5 Apobec4-201ENSMUST00000068875 1566 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Ccdc88cQ6VGS5 Gm28403-201ENSMUST00000188743 2710 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Ccdc88cQ6VGS5 Pdgfd-203ENSMUST00000214892 2862 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Ccdc88cQ6VGS5 Rnmt-201ENSMUST00000009679 5008 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Ccdc88cQ6VGS5 Cbll1-202ENSMUST00000085487 1332 ntTSL 5 BASIC8.27□□□□□ -1.09
Ccdc88cQ6VGS5 AC154522.1-201ENSMUST00000224647 1903 ntBASIC8.27□□□□□ -1.09
Ccdc88cQ6VGS5 Gm45904-201ENSMUST00000213082 2330 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Ccdc88cQ6VGS5 Gm13490-201ENSMUST00000143870 2409 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Ccdc88cQ6VGS5 Erc1-201ENSMUST00000032279 8356 ntAPPRIS P2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Ccdc88cQ6VGS5 Zfp473-207ENSMUST00000149011 9230 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Ccdc88cQ6VGS5 Vgll1-201ENSMUST00000033465 2281 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Ccdc88cQ6VGS5 Carf-206ENSMUST00000180952 2157 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
Ccdc88cQ6VGS5 Igkv8-21-201ENSMUST00000103387 382 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
Ccdc88cQ6VGS5 Gm26417-201ENSMUST00000104274 135 ntBASIC8.27□□□□□ -1.09
Ccdc88cQ6VGS5 Gm13871-201ENSMUST00000107318 936 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
Ccdc88cQ6VGS5 Gm11757-201ENSMUST00000107320 936 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
Ccdc88cQ6VGS5 Gm11758-201ENSMUST00000107326 936 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
Ccdc88cQ6VGS5 Tpmt-202ENSMUST00000110118 881 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Ccdc88cQ6VGS5 Gm12959-201ENSMUST00000119396 403 ntBASIC8.27□□□□□ -1.09
Ccdc88cQ6VGS5 Gm13940-201ENSMUST00000121023 301 ntBASIC8.27□□□□□ -1.09
Ccdc88cQ6VGS5 Gm7599-201ENSMUST00000121453 796 ntBASIC8.27□□□□□ -1.09
Ccdc88cQ6VGS5 Halr1-201ENSMUST00000125374 391 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Ccdc88cQ6VGS5 Gm15792-201ENSMUST00000137099 769 ntTSL 3 BASIC8.27□□□□□ -1.09
Ccdc88cQ6VGS5 C230035I16Rik-201ENSMUST00000141543 623 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Ccdc88cQ6VGS5 Stau2-209ENSMUST00000145092 564 ntTSL 5 BASIC8.27□□□□□ -1.09
Ccdc88cQ6VGS5 9530046B11Rik-201ENSMUST00000149413 1157 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Ccdc88cQ6VGS5 Nol12-205ENSMUST00000149580 646 ntTSL 5 BASIC8.27□□□□□ -1.09
Ccdc88cQ6VGS5 Gm16138-201ENSMUST00000159341 821 ntBASIC8.27□□□□□ -1.09
Ccdc88cQ6VGS5 Gm3149-203ENSMUST00000179649 618 ntAPPRIS ALT2 TSL 2 BASIC8.27□□□□□ -1.09
Ccdc88cQ6VGS5 C730036E19Rik-201ENSMUST00000188305 1102 ntTSL 5 BASIC8.27□□□□□ -1.09
Ccdc88cQ6VGS5 Smpx-208ENSMUST00000190091 1087 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Ccdc88cQ6VGS5 Gm3476-203ENSMUST00000190582 612 ntTSL 5 BASIC8.27□□□□□ -1.09
Ccdc88cQ6VGS5 4930425L21Rik-201ENSMUST00000203439 899 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Ccdc88cQ6VGS5 Gm44112-201ENSMUST00000204787 372 ntBASIC8.27□□□□□ -1.09
Ccdc88cQ6VGS5 Gm45301-201ENSMUST00000211359 933 ntTSL 5 BASIC8.27□□□□□ -1.09
Ccdc88cQ6VGS5 Gm34215-201ENSMUST00000221599 355 ntTSL 5 BASIC8.27□□□□□ -1.09
Ccdc88cQ6VGS5 AC140451.1-201ENSMUST00000227984 737 ntBASIC8.27□□□□□ -1.09
Ccdc88cQ6VGS5 Olfr348-202ENSMUST00000213498 3540 ntAPPRIS P1 TSL 3 BASIC8.27□□□□□ -1.09
Ccdc88cQ6VGS5 AC155298.3-201ENSMUST00000225307 3220 ntBASIC8.27□□□□□ -1.09
Ccdc88cQ6VGS5 Slc25a53-203ENSMUST00000113070 3140 ntTSL 5 BASIC8.27□□□□□ -1.09
Ccdc88cQ6VGS5 Vma21-203ENSMUST00000114577 4652 ntTSL 3 BASIC8.27□□□□□ -1.09
Ccdc88cQ6VGS5 Olfr1426-204ENSMUST00000219005 2507 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Ccdc88cQ6VGS5 Ifit3b-201ENSMUST00000076249 2000 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Ccdc88cQ6VGS5 Cltc-202ENSMUST00000103186 6519 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Ccdc88cQ6VGS5 Retreg1-203ENSMUST00000226438 2783 ntBASIC8.26□□□□□ -1.09
Ccdc88cQ6VGS5 Olfr523-205ENSMUST00000215785 4165 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
Ccdc88cQ6VGS5 Adgrl2-208ENSMUST00000197567 5585 ntAPPRIS P2 TSL 2 BASIC8.26□□□□□ -1.09
Ccdc88cQ6VGS5 Frem1-201ENSMUST00000071708 9307 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
Ccdc88cQ6VGS5 Naalad2-201ENSMUST00000001826 2831 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Ccdc88cQ6VGS5 Gm3138-201ENSMUST00000165431 1760 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Ccdc88cQ6VGS5 CT573019.1-201ENSMUST00000227762 1689 ntBASIC8.26□□□□□ -1.09
Ccdc88cQ6VGS5 Zfp58-204ENSMUST00000171518 2300 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Ccdc88cQ6VGS5 5330413P13Rik-202ENSMUST00000143453 3630 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Ccdc88cQ6VGS5 Smpd4-201ENSMUST00000006053 4623 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Ccdc88cQ6VGS5 Prrg1-202ENSMUST00000114025 3964 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Ccdc88cQ6VGS5 Gm13619-201ENSMUST00000155722 2138 ntTSL 2 BASIC8.26□□□□□ -1.09
Ccdc88cQ6VGS5 Xlr5a-203ENSMUST00000114521 1474 ntTSL 5 BASIC8.26□□□□□ -1.09
Ccdc88cQ6VGS5 Ptk6-201ENSMUST00000016511 3689 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Ccdc88cQ6VGS5 Olfr15-203ENSMUST00000214590 6240 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Ccdc88cQ6VGS5 Ighd-202ENSMUST00000194162 1806 ntAPPRIS P5 BASIC8.26□□□□□ -1.09
Ccdc88cQ6VGS5 Glyat-201ENSMUST00000044976 2822 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Ccdc88cQ6VGS5 Gm11864-201ENSMUST00000116179 1220 ntBASIC8.26□□□□□ -1.09
Ccdc88cQ6VGS5 Gm15105-201ENSMUST00000117777 204 ntBASIC8.26□□□□□ -1.09
Ccdc88cQ6VGS5 Gm7746-201ENSMUST00000120966 503 ntBASIC8.26□□□□□ -1.09
Ccdc88cQ6VGS5 Olfr443-ps1-201ENSMUST00000163240 915 ntBASIC8.26□□□□□ -1.09
Ccdc88cQ6VGS5 Gm5272-201ENSMUST00000182730 982 ntBASIC8.26□□□□□ -1.09
Ccdc88cQ6VGS5 Mir7005-201ENSMUST00000185089 69 ntBASIC8.26□□□□□ -1.09
Ccdc88cQ6VGS5 Gm8004-201ENSMUST00000187782 617 ntBASIC8.26□□□□□ -1.09
Ccdc88cQ6VGS5 Prkar2a-206ENSMUST00000195405 1143 ntTSL 5 BASIC8.26□□□□□ -1.09
Ccdc88cQ6VGS5 Olfr440-ps1-201ENSMUST00000204044 917 ntBASIC8.26□□□□□ -1.09
Ccdc88cQ6VGS5 Gm45497-201ENSMUST00000211701 740 ntBASIC8.26□□□□□ -1.09
Ccdc88cQ6VGS5 Gm45725-201ENSMUST00000212962 337 ntBASIC8.26□□□□□ -1.09
Ccdc88cQ6VGS5 D330045A20Rik-201ENSMUST00000046763 3737 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Ccdc88cQ6VGS5 Ing5-201ENSMUST00000027505 4533 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms