Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 1810062O18Rik-204ENSMUST00000141265 751 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
ClpbQ60649 Gm14376-201ENSMUST00000145297 297 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
ClpbQ60649 Gm24239-201ENSMUST00000157791 255 ntBASIC7.3□□□□□ -1.24
ClpbQ60649 Gm22670-201ENSMUST00000158724 143 ntBASIC7.3□□□□□ -1.24
ClpbQ60649 Rpain-210ENSMUST00000167509 519 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
ClpbQ60649 Scgb2b12-201ENSMUST00000183195 511 ntAPPRIS P1 TSL 2 BASIC7.3□□□□□ -1.24
ClpbQ60649 Gm8529-201ENSMUST00000183298 745 ntBASIC7.3□□□□□ -1.24
ClpbQ60649 Gm28341-201ENSMUST00000190883 472 ntBASIC7.3□□□□□ -1.24
ClpbQ60649 Gm9723-201ENSMUST00000192100 457 ntBASIC7.3□□□□□ -1.24
ClpbQ60649 Gm6197-201ENSMUST00000192273 454 ntBASIC7.3□□□□□ -1.24
ClpbQ60649 Gm37977-201ENSMUST00000193096 721 ntBASIC7.3□□□□□ -1.24
ClpbQ60649 Gm5541-201ENSMUST00000193248 1113 ntBASIC7.3□□□□□ -1.24
ClpbQ60649 4930584F24Rik-204ENSMUST00000198070 1163 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
ClpbQ60649 Scn8a-207ENSMUST00000200959 587 ntTSL 3 BASIC7.3□□□□□ -1.24
ClpbQ60649 Dcp2-202ENSMUST00000202306 398 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
ClpbQ60649 Gm44448-201ENSMUST00000205104 393 ntTSL 5 BASIC7.3□□□□□ -1.24
ClpbQ60649 Gm19011-201ENSMUST00000221777 808 ntBASIC7.3□□□□□ -1.24
ClpbQ60649 Vmn1r41-204ENSMUST00000227039 985 ntBASIC7.3□□□□□ -1.24
ClpbQ60649 AC125539.1-201ENSMUST00000227423 622 ntBASIC7.3□□□□□ -1.24
ClpbQ60649 Tas2r116-201ENSMUST00000032315 918 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
ClpbQ60649 Olfr290-201ENSMUST00000073468 948 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
ClpbQ60649 Efna5-202ENSMUST00000078839 643 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
ClpbQ60649 Olfr742-201ENSMUST00000089836 1120 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
ClpbQ60649 Zfp120-202ENSMUST00000094538 1245 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
ClpbQ60649 Olfr665-201ENSMUST00000098165 951 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
ClpbQ60649 Senp8-207ENSMUST00000217093 1663 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
ClpbQ60649 Gm40055-201ENSMUST00000196091 2742 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
ClpbQ60649 Gm16508-201ENSMUST00000197066 2742 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
ClpbQ60649 Pdzd9-201ENSMUST00000033178 2180 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
ClpbQ60649 Trappc8-201ENSMUST00000025177 5178 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
ClpbQ60649 Pfkfb2-204ENSMUST00000171479 3342 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
ClpbQ60649 Asxl2-201ENSMUST00000092003 11934 ntTSL 5 BASIC7.3□□□□□ -1.24
ClpbQ60649 Fryl-202ENSMUST00000101127 11340 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
ClpbQ60649 Pmfbp1-201ENSMUST00000034162 3396 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
ClpbQ60649 Ulk4-209ENSMUST00000171923 4103 ntAPPRIS P2 TSL 5 BASIC7.29□□□□□ -1.24
ClpbQ60649 Tnik-203ENSMUST00000159680 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
ClpbQ60649 Zc3h11a-201ENSMUST00000027736 4395 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
ClpbQ60649 Atf2-201ENSMUST00000055833 4210 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
ClpbQ60649 Mmp3-201ENSMUST00000034497 1801 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
ClpbQ60649 Alkbh8-206ENSMUST00000212294 2584 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
ClpbQ60649 Casr-202ENSMUST00000114847 4303 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
ClpbQ60649 Ttc39d-202ENSMUST00000134652 2438 ntAPPRIS P1 TSL 3 BASIC7.29□□□□□ -1.24
ClpbQ60649 Gatad2b-204ENSMUST00000199607 2418 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
ClpbQ60649 Gm37980-201ENSMUST00000194420 1910 ntBASIC7.29□□□□□ -1.24
ClpbQ60649 Dppa2-201ENSMUST00000097175 1948 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
ClpbQ60649 Nasp-201ENSMUST00000030456 2520 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
ClpbQ60649 Cpeb4-202ENSMUST00000109412 6303 ntAPPRIS ALT1 TSL 5 BASIC7.29□□□□□ -1.24
ClpbQ60649 Zfp947-201ENSMUST00000080249 2872 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
ClpbQ60649 Bdnf-211ENSMUST00000176893 3707 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
ClpbQ60649 Slc22a8-201ENSMUST00000010251 3478 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
ClpbQ60649 Mir688-201ENSMUST00000102055 75 ntBASIC7.29□□□□□ -1.24
ClpbQ60649 Mir763-201ENSMUST00000103249 120 ntBASIC7.29□□□□□ -1.24
ClpbQ60649 Gm6746-201ENSMUST00000108774 483 ntBASIC7.29□□□□□ -1.24
ClpbQ60649 Gm13742-201ENSMUST00000118805 457 ntBASIC7.29□□□□□ -1.24
ClpbQ60649 Gm10639-201ENSMUST00000119823 993 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
ClpbQ60649 Gm15763-201ENSMUST00000120136 403 ntBASIC7.29□□□□□ -1.24
ClpbQ60649 Gm12967-201ENSMUST00000122147 289 ntBASIC7.29□□□□□ -1.24
ClpbQ60649 Gm13964-201ENSMUST00000133815 734 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
ClpbQ60649 4930439A04Rik-201ENSMUST00000137241 739 ntTSL 3 BASIC7.29□□□□□ -1.24
ClpbQ60649 A930031H19Rik-202ENSMUST00000153810 949 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
ClpbQ60649 Gm24130-201ENSMUST00000158536 151 ntBASIC7.29□□□□□ -1.24
ClpbQ60649 Gm17233-201ENSMUST00000168470 698 ntTSL 3 BASIC7.29□□□□□ -1.24
ClpbQ60649 Gm5698-201ENSMUST00000178317 724 ntBASIC7.29□□□□□ -1.24
ClpbQ60649 n-R5s115-201ENSMUST00000179019 119 ntBASIC7.29□□□□□ -1.24
ClpbQ60649 Gm20379-201ENSMUST00000188317 1204 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
ClpbQ60649 Gm28239-201ENSMUST00000190225 447 ntBASIC7.29□□□□□ -1.24
ClpbQ60649 Gm37481-201ENSMUST00000195176 403 ntBASIC7.29□□□□□ -1.24
ClpbQ60649 Gm42161-201ENSMUST00000196278 726 ntTSL 5 BASIC7.29□□□□□ -1.24
ClpbQ60649 Gm18131-201ENSMUST00000199241 449 ntBASIC7.29□□□□□ -1.24
ClpbQ60649 Gm44245-201ENSMUST00000204304 232 ntBASIC7.29□□□□□ -1.24
ClpbQ60649 4930584E12Rik-201ENSMUST00000216646 981 ntBASIC7.29□□□□□ -1.24
ClpbQ60649 Nqo2-204ENSMUST00000222740 995 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
ClpbQ60649 Mif-ps7-201ENSMUST00000223357 327 ntBASIC7.29□□□□□ -1.24
ClpbQ60649 AC099629.1-201ENSMUST00000226778 464 ntBASIC7.29□□□□□ -1.24
ClpbQ60649 n-R5s193-201ENSMUST00000082864 109 ntBASIC7.29□□□□□ -1.24
ClpbQ60649 Ighv1-13-201ENSMUST00000095364 294 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
ClpbQ60649 Olfr1231-201ENSMUST00000099786 942 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
ClpbQ60649 Anxa9-201ENSMUST00000015846 1851 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
ClpbQ60649 Gm19028-201ENSMUST00000189614 1873 ntBASIC7.29□□□□□ -1.24
ClpbQ60649 Pp2d1-201ENSMUST00000056198 2476 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
ClpbQ60649 Prkacb-201ENSMUST00000005164 4001 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
ClpbQ60649 Ttc9c-202ENSMUST00000096751 3509 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
ClpbQ60649 C1s1-204ENSMUST00000162443 2906 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
ClpbQ60649 Dennd6a-203ENSMUST00000224111 2692 ntBASIC7.29□□□□□ -1.24
ClpbQ60649 Crbn-202ENSMUST00000113239 2084 ntAPPRIS P4 TSL 1 (best) BASIC7.29□□□□□ -1.24
ClpbQ60649 4933404O12Rik-202ENSMUST00000181190 4058 ntTSL 5 BASIC7.29□□□□□ -1.24
ClpbQ60649 Gm6787-201ENSMUST00000123120 1454 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
ClpbQ60649 Gm6729-201ENSMUST00000165173 1452 ntBASIC7.29□□□□□ -1.24
ClpbQ60649 Gm43537-201ENSMUST00000199064 3110 ntBASIC7.29□□□□□ -1.24
ClpbQ60649 Olfr466-202ENSMUST00000214214 4192 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
ClpbQ60649 Gmeb1-203ENSMUST00000105965 4632 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
ClpbQ60649 Kpna2-ps-201ENSMUST00000120025 1569 ntBASIC7.29□□□□□ -1.24
ClpbQ60649 Gm44996-201ENSMUST00000208787 2980 ntBASIC7.29□□□□□ -1.24
ClpbQ60649 Gas2l3-202ENSMUST00000105298 6305 ntAPPRIS P2 TSL 1 (best) BASIC7.29□□□□□ -1.24
ClpbQ60649 Pabpc4l-202ENSMUST00000192793 5252 ntAPPRIS P1 TSL 3 BASIC7.29□□□□□ -1.24
ClpbQ60649 Baz2b-201ENSMUST00000090925 7576 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
ClpbQ60649 Atxn7l1-208ENSMUST00000136644 3155 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
ClpbQ60649 Srcap-214ENSMUST00000190390 9633 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
ClpbQ60649 Ston1-201ENSMUST00000064035 3287 ntAPPRIS P1 TSL 2 BASIC7.28□□□□□ -1.24
ClpbQ60649 Abcc12-203ENSMUST00000131423 4893 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 71.4 ms