Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Gm10744-201ENSMUST00000220184 2706 ntBASIC8.98□□□□□ -0.97
Vps54Q5SPW0 Dennd2c-204ENSMUST00000173206 4879 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
Vps54Q5SPW0 Mgat4a-205ENSMUST00000151952 7251 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Vps54Q5SPW0 St3gal6-202ENSMUST00000114358 2264 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Vps54Q5SPW0 Olfr1388-202ENSMUST00000215226 3034 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Vps54Q5SPW0 Sprr2a1-201ENSMUST00000074449 3003 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Vps54Q5SPW0 Grin2a-206ENSMUST00000199708 14634 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Vps54Q5SPW0 9130409I23Rik-201ENSMUST00000036819 1898 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Vps54Q5SPW0 Nadk-201ENSMUST00000030939 2946 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Vps54Q5SPW0 Slitrk2-202ENSMUST00000166241 7769 ntAPPRIS P1 TSL 2 BASIC8.98□□□□□ -0.97
Vps54Q5SPW0 4931403G20Rik-201ENSMUST00000180861 1699 ntTSL 5 BASIC8.97□□□□□ -0.97
Vps54Q5SPW0 2610203C20Rik-204ENSMUST00000181214 3525 ntTSL 5 BASIC8.97□□□□□ -0.97
Vps54Q5SPW0 Omg-201ENSMUST00000164465 2228 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Vps54Q5SPW0 Marf1-201ENSMUST00000090300 7765 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Vps54Q5SPW0 Ftmt-201ENSMUST00000025388 1451 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Vps54Q5SPW0 Olfr399-202ENSMUST00000215915 1796 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Vps54Q5SPW0 Pi4ka-201ENSMUST00000036161 6431 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Vps54Q5SPW0 Zfp85os-201ENSMUST00000049518 2624 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Vps54Q5SPW0 Tecta-201ENSMUST00000042190 7338 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Vps54Q5SPW0 Trmt10b-201ENSMUST00000044673 2064 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Vps54Q5SPW0 AC123832.1-201ENSMUST00000214120 2371 ntBASIC8.97□□□□□ -0.97
Vps54Q5SPW0 Igkv8-21-201ENSMUST00000103387 382 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Vps54Q5SPW0 Plac1-202ENSMUST00000114843 1201 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Vps54Q5SPW0 Defa-ps7-201ENSMUST00000117139 168 ntBASIC8.97□□□□□ -0.97
Vps54Q5SPW0 Gm13414-201ENSMUST00000117516 727 ntBASIC8.97□□□□□ -0.97
Vps54Q5SPW0 Gm15913-201ENSMUST00000118492 331 ntBASIC8.97□□□□□ -0.97
Vps54Q5SPW0 Gm12844-201ENSMUST00000119463 582 ntBASIC8.97□□□□□ -0.97
Vps54Q5SPW0 Gm15644-201ENSMUST00000121764 387 ntBASIC8.97□□□□□ -0.97
Vps54Q5SPW0 Esd-203ENSMUST00000175887 809 ntTSL 5 BASIC8.97□□□□□ -0.97
Vps54Q5SPW0 Gm21430-201ENSMUST00000182998 998 ntBASIC8.97□□□□□ -0.97
Vps54Q5SPW0 Lamtor3-203ENSMUST00000197064 733 ntAPPRIS P1 TSL 3 BASIC8.97□□□□□ -0.97
Vps54Q5SPW0 4930568A13Rik-201ENSMUST00000199961 1061 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Vps54Q5SPW0 Gm44044-201ENSMUST00000205178 1089 ntBASIC8.97□□□□□ -0.97
Vps54Q5SPW0 Gm44785-202ENSMUST00000208294 932 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Vps54Q5SPW0 Gm7394-201ENSMUST00000209138 1032 ntBASIC8.97□□□□□ -0.97
Vps54Q5SPW0 Olfr687-202ENSMUST00000218046 1004 ntTSL 5 BASIC8.97□□□□□ -0.97
Vps54Q5SPW0 Gm45537-201ENSMUST00000211539 2708 ntBASIC8.97□□□□□ -0.97
Vps54Q5SPW0 A730011C13Rik-202ENSMUST00000141787 1877 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Vps54Q5SPW0 Gm42771-201ENSMUST00000198342 2486 ntBASIC8.97□□□□□ -0.97
Vps54Q5SPW0 Rtel1-205ENSMUST00000108815 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Vps54Q5SPW0 Recql5-201ENSMUST00000021097 3971 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Vps54Q5SPW0 Speer4e-201ENSMUST00000159973 1603 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Vps54Q5SPW0 Hsd11b1-201ENSMUST00000016338 1623 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Vps54Q5SPW0 Sp1-204ENSMUST00000165924 4081 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Vps54Q5SPW0 Zfp663-202ENSMUST00000103085 3451 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Vps54Q5SPW0 Wdr19-201ENSMUST00000041892 4401 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Vps54Q5SPW0 Gm10601-201ENSMUST00000120436 1422 ntBASIC8.97□□□□□ -0.97
Vps54Q5SPW0 Gm20767-202ENSMUST00000225683 1427 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Vps54Q5SPW0 Pfkfb3-206ENSMUST00000114846 4634 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Vps54Q5SPW0 Gucy1b2-201ENSMUST00000022501 2711 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.97
Vps54Q5SPW0 Trpm8-204ENSMUST00000171176 3723 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Vps54Q5SPW0 Patj-203ENSMUST00000102792 3755 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Vps54Q5SPW0 Slc1a3-201ENSMUST00000005493 4163 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Vps54Q5SPW0 Exd1-203ENSMUST00000171024 5290 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Vps54Q5SPW0 Klf10-202ENSMUST00000226363 2917 ntBASIC8.96□□□□□ -0.97
Vps54Q5SPW0 Fer1l6-203ENSMUST00000161028 5714 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.97
Vps54Q5SPW0 Gm37367-201ENSMUST00000191771 2602 ntBASIC8.96□□□□□ -0.97
Vps54Q5SPW0 Ifit1bl2-201ENSMUST00000087357 3365 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Vps54Q5SPW0 Ccdc142os-201ENSMUST00000125657 891 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Vps54Q5SPW0 Rsf1os1-201ENSMUST00000126902 324 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Vps54Q5SPW0 Gm10157-201ENSMUST00000139408 343 ntBASIC8.96□□□□□ -0.98
Vps54Q5SPW0 Gm17032-201ENSMUST00000164367 338 ntTSL 3 BASIC8.96□□□□□ -0.98
Vps54Q5SPW0 Gm20702-201ENSMUST00000176181 460 ntBASIC8.96□□□□□ -0.98
Vps54Q5SPW0 Ly6g-202ENSMUST00000190262 941 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.98
Vps54Q5SPW0 Gm19211-201ENSMUST00000200251 1206 ntBASIC8.96□□□□□ -0.98
Vps54Q5SPW0 Gm43040-201ENSMUST00000202399 558 ntBASIC8.96□□□□□ -0.98
Vps54Q5SPW0 Tas2r116-201ENSMUST00000032315 918 ntAPPRIS P1 BASIC8.96□□□□□ -0.98
Vps54Q5SPW0 Vmn1r198-201ENSMUST00000091733 903 ntAPPRIS P2 BASIC8.96□□□□□ -0.98
Vps54Q5SPW0 Zfp120-202ENSMUST00000094538 1245 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.98
Vps54Q5SPW0 Gm13986-202ENSMUST00000148587 3469 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Vps54Q5SPW0 Slc25a53-203ENSMUST00000113070 3140 ntTSL 5 BASIC8.96□□□□□ -0.98
Vps54Q5SPW0 Specc1-203ENSMUST00000108709 6843 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.98
Vps54Q5SPW0 R3hdm2-203ENSMUST00000105249 3654 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.98
Vps54Q5SPW0 Glce-201ENSMUST00000034785 4626 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Vps54Q5SPW0 Olfr1198-203ENSMUST00000215529 3413 ntAPPRIS P1 TSL 3 BASIC8.96□□□□□ -0.98
Vps54Q5SPW0 Ssh2-201ENSMUST00000037912 9178 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.98
Vps54Q5SPW0 AC165260.6-204ENSMUST00000225571 3508 ntBASIC8.96□□□□□ -0.98
Vps54Q5SPW0 Olfr221-201ENSMUST00000052560 2741 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.98
Vps54Q5SPW0 Ttc17-201ENSMUST00000055081 3163 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Vps54Q5SPW0 Cntrl-203ENSMUST00000113032 7085 ntAPPRIS P2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Vps54Q5SPW0 Ccdc80-202ENSMUST00000099498 3671 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Vps54Q5SPW0 Zfp426-210ENSMUST00000167457 4262 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Vps54Q5SPW0 BC147527-202ENSMUST00000225029 1595 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
Vps54Q5SPW0 Pp2d1-201ENSMUST00000056198 2476 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Vps54Q5SPW0 Rdh1-201ENSMUST00000073639 3930 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Vps54Q5SPW0 Fbxw7-203ENSMUST00000107678 4073 ntAPPRIS ALT1 TSL 5 BASIC8.95□□□□□ -0.98
Vps54Q5SPW0 Gm5182-201ENSMUST00000217708 6092 ntBASIC8.95□□□□□ -0.98
Vps54Q5SPW0 Gm16427-202ENSMUST00000200745 1749 ntAPPRIS P5 TSL 2 BASIC8.95□□□□□ -0.98
Vps54Q5SPW0 Glmp-209ENSMUST00000177005 4219 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Vps54Q5SPW0 Mir503-201ENSMUST00000102168 71 ntBASIC8.95□□□□□ -0.98
Vps54Q5SPW0 Ighv1-63-201ENSMUST00000103534 351 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
Vps54Q5SPW0 Rpl35a-203ENSMUST00000115076 519 ntAPPRIS P1 TSL 2 BASIC8.95□□□□□ -0.98
Vps54Q5SPW0 Gm11517-201ENSMUST00000119491 387 ntBASIC8.95□□□□□ -0.98
Vps54Q5SPW0 Olfr819-201ENSMUST00000167974 963 ntAPPRIS P2 BASIC8.95□□□□□ -0.98
Vps54Q5SPW0 Olfr247-201ENSMUST00000170920 963 ntAPPRIS ALT2 BASIC8.95□□□□□ -0.98
Vps54Q5SPW0 Gm27026-201ENSMUST00000183003 892 ntBASIC8.95□□□□□ -0.98
Vps54Q5SPW0 Gm27596-201ENSMUST00000185061 83 ntBASIC8.95□□□□□ -0.98
Vps54Q5SPW0 Pdc-204ENSMUST00000191228 1235 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Vps54Q5SPW0 Gm19331-201ENSMUST00000193799 1092 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Vps54Q5SPW0 Gm42723-201ENSMUST00000199966 1044 ntBASIC8.95□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 84.2 ms