Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm16758-201ENSMUST00000149552 3848 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col8a1Q00780 Adgrb3-205ENSMUST00000135518 5432 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Col8a1Q00780 Slc12a6-202ENSMUST00000053666 6060 ntAPPRIS ALT1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Col8a1Q00780 Cast-201ENSMUST00000065629 2910 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Col8a1Q00780 Gm42897-201ENSMUST00000201486 2112 ntBASIC6.85□□□□□ -1.31
Col8a1Q00780 Gm28819-202ENSMUST00000187416 1335 ntTSL 5 BASIC6.85□□□□□ -1.31
Col8a1Q00780 Gm44850-201ENSMUST00000205621 1329 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col8a1Q00780 Prl3a1-201ENSMUST00000049463 1342 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Col8a1Q00780 4632432E15Rik-201ENSMUST00000191824 2439 ntBASIC6.85□□□□□ -1.31
Col8a1Q00780 Xlr5b-202ENSMUST00000114518 1652 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Col8a1Q00780 Xlr5a-204ENSMUST00000179600 1650 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Col8a1Q00780 Gm37163-201ENSMUST00000195439 1690 ntBASIC6.85□□□□□ -1.31
Col8a1Q00780 Xlr5a-201ENSMUST00000078574 1650 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Col8a1Q00780 Usp3-202ENSMUST00000098613 2797 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col8a1Q00780 Olfr1198-202ENSMUST00000215179 3145 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Col8a1Q00780 Npm1-203ENSMUST00000101375 966 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col8a1Q00780 Arpc3-204ENSMUST00000111716 838 ntTSL 2 BASIC6.85□□□□□ -1.31
Col8a1Q00780 Gm11393-201ENSMUST00000118019 288 ntBASIC6.85□□□□□ -1.31
Col8a1Q00780 Gm13858-201ENSMUST00000118862 671 ntBASIC6.85□□□□□ -1.31
Col8a1Q00780 Gm13651-201ENSMUST00000119086 1110 ntBASIC6.85□□□□□ -1.31
Col8a1Q00780 Gm6620-201ENSMUST00000120113 715 ntBASIC6.85□□□□□ -1.31
Col8a1Q00780 Gm12925-201ENSMUST00000130791 678 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col8a1Q00780 Platr3-201ENSMUST00000146980 412 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col8a1Q00780 Gm11423-202ENSMUST00000152784 686 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col8a1Q00780 Gm6205-201ENSMUST00000165424 1080 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Col8a1Q00780 Gm17546-201ENSMUST00000168960 733 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col8a1Q00780 Olfr180-201ENSMUST00000171656 1154 ntAPPRIS P2 TSL 2 BASIC6.85□□□□□ -1.31
Col8a1Q00780 Gm3500-202ENSMUST00000178058 609 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col8a1Q00780 A530083I20Rik-202ENSMUST00000180877 1022 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col8a1Q00780 Gm27026-201ENSMUST00000183003 892 ntBASIC6.85□□□□□ -1.31
Col8a1Q00780 4930554C24Rik-201ENSMUST00000187735 1084 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col8a1Q00780 Gm37614-201ENSMUST00000195645 210 ntBASIC6.85□□□□□ -1.31
Col8a1Q00780 1700042D02Rik-201ENSMUST00000198232 389 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col8a1Q00780 Gm36070-202ENSMUST00000200467 961 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col8a1Q00780 4930402F11Rik-202ENSMUST00000207781 1178 ntTSL 5 BASIC6.85□□□□□ -1.31
Col8a1Q00780 Gm5086-201ENSMUST00000210022 1297 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col8a1Q00780 Gm6657-204ENSMUST00000211288 1091 ntAPPRIS P5 TSL 5 BASIC6.85□□□□□ -1.31
Col8a1Q00780 Gm17875-201ENSMUST00000216005 941 ntBASIC6.85□□□□□ -1.31
Col8a1Q00780 Gm19186-201ENSMUST00000219922 333 ntBASIC6.85□□□□□ -1.31
Col8a1Q00780 AC160863.3-201ENSMUST00000220129 1228 ntTSL 5 BASIC6.85□□□□□ -1.31
Col8a1Q00780 AC192616.3-201ENSMUST00000220797 1124 ntBASIC6.85□□□□□ -1.31
Col8a1Q00780 Glycam1-204ENSMUST00000228895 641 ntBASIC6.85□□□□□ -1.31
Col8a1Q00780 Gstp3-201ENSMUST00000076451 685 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col8a1Q00780 Gm3512-201ENSMUST00000090663 441 ntTSL 5 BASIC6.85□□□□□ -1.31
Col8a1Q00780 Olfr676-201ENSMUST00000098162 954 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Col8a1Q00780 Rapgef4-202ENSMUST00000090826 4181 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Col8a1Q00780 Rc3h1-202ENSMUST00000161609 11006 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Col8a1Q00780 AC091783.1-201ENSMUST00000223614 1613 ntBASIC6.85□□□□□ -1.31
Col8a1Q00780 Runx1t1-203ENSMUST00000098257 2332 ntAPPRIS ALT1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Col8a1Q00780 Cep95-201ENSMUST00000018516 2696 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
Col8a1Q00780 Mapk9-203ENSMUST00000102778 4447 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col8a1Q00780 Gm43766-201ENSMUST00000200590 5417 ntBASIC6.85□□□□□ -1.31
Col8a1Q00780 Pex5l-210ENSMUST00000193681 3620 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col8a1Q00780 Gm37953-201ENSMUST00000195293 1884 ntBASIC6.85□□□□□ -1.31
Col8a1Q00780 Eif4enif1-201ENSMUST00000020734 3565 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col8a1Q00780 Gm37739-201ENSMUST00000191742 1505 ntTSL 5 BASIC6.85□□□□□ -1.31
Col8a1Q00780 Gm38003-201ENSMUST00000191968 1504 ntTSL 5 BASIC6.85□□□□□ -1.31
Col8a1Q00780 Ttf2-201ENSMUST00000076941 4541 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Col8a1Q00780 Zfp882-201ENSMUST00000110002 3152 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Col8a1Q00780 Ghitm-202ENSMUST00000165649 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Col8a1Q00780 Pax9-201ENSMUST00000001538 4166 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Col8a1Q00780 Gm16794-203ENSMUST00000185324 1490 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col8a1Q00780 Ctsm-201ENSMUST00000099451 1457 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Col8a1Q00780 Fer1l6-203ENSMUST00000161028 5714 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Col8a1Q00780 Pex5l-208ENSMUST00000192093 3421 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
Col8a1Q00780 Sp1-204ENSMUST00000165924 4081 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Col8a1Q00780 Naip1-204ENSMUST00000222155 5361 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Col8a1Q00780 CT009550.4-202ENSMUST00000227369 3076 ntBASIC6.85□□□□□ -1.31
Col8a1Q00780 C79798-201ENSMUST00000131588 1793 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col8a1Q00780 Gm6356-201ENSMUST00000166618 1757 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Col8a1Q00780 Gm18639-201ENSMUST00000210442 1769 ntBASIC6.85□□□□□ -1.31
Col8a1Q00780 AC138284.3-201ENSMUST00000217345 4663 ntBASIC6.85□□□□□ -1.31
Col8a1Q00780 Fgr-201ENSMUST00000030693 3363 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Col8a1Q00780 Cfap43-205ENSMUST00000160247 5264 ntTSL 5 BASIC6.85□□□□□ -1.31
Col8a1Q00780 Nron-203ENSMUST00000156297 3340 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Col8a1Q00780 Gm8212-201ENSMUST00000166350 1404 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Col8a1Q00780 Eftud2-201ENSMUST00000021306 3324 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Col8a1Q00780 Ntsr1-201ENSMUST00000029084 3917 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Col8a1Q00780 Gtf3c2-210ENSMUST00000202639 4200 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
Col8a1Q00780 Gm831-201ENSMUST00000149942 4517 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Col8a1Q00780 Tex11-203ENSMUST00000113718 3278 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
Col8a1Q00780 Muc2-201ENSMUST00000026590 2032 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Col8a1Q00780 Vegfd-201ENSMUST00000033751 2049 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Col8a1Q00780 Zfp85os-201ENSMUST00000049518 2624 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Col8a1Q00780 Dcaf11-201ENSMUST00000072530 2601 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Col8a1Q00780 AC136986.2-201ENSMUST00000220880 2944 ntBASIC6.84□□□□□ -1.31
Col8a1Q00780 Camk2a-201ENSMUST00000025519 3244 ntTSL 5 BASIC6.84□□□□□ -1.31
Col8a1Q00780 Gm3327-201ENSMUST00000168906 1389 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Col8a1Q00780 Gm4863-201ENSMUST00000196907 1381 ntBASIC6.84□□□□□ -1.31
Col8a1Q00780 Gm37139-201ENSMUST00000192134 4419 ntBASIC6.84□□□□□ -1.31
Col8a1Q00780 Havcr1-203ENSMUST00000109223 1982 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Col8a1Q00780 Anpep-202ENSMUST00000107392 3797 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Col8a1Q00780 Vmn2r-ps96-201ENSMUST00000221218 2545 ntBASIC6.84□□□□□ -1.31
Col8a1Q00780 March7-201ENSMUST00000067542 2244 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Col8a1Q00780 Vmn1r70-203ENSMUST00000226255 4868 ntAPPRIS P2 BASIC6.84□□□□□ -1.31
Col8a1Q00780 Lilrb4a-201ENSMUST00000217706 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Col8a1Q00780 Slc7a2-202ENSMUST00000098816 3677 ntAPPRIS ALT1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Col8a1Q00780 Wdpcp-201ENSMUST00000020568 2792 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Col8a1Q00780 Crtam-201ENSMUST00000034519 1876 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
Col8a1Q00780 AC121793.2-201ENSMUST00000217127 2728 ntTSL 5 BASIC6.84□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 75.9 ms