Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Gm8004-201ENSMUST00000187782 617 ntBASIC9.57□□□□□ -0.88
Msh6P54276 Tial1-214ENSMUST00000205835 562 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Msh6P54276 AC118476.2-201ENSMUST00000215206 757 ntTSL 3 BASIC9.57□□□□□ -0.88
Msh6P54276 Vmn2r-ps26-201ENSMUST00000202039 2111 ntBASIC9.57□□□□□ -0.88
Msh6P54276 Slc8a1-202ENSMUST00000163123 2877 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Msh6P54276 Gm13262-201ENSMUST00000149014 2022 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Msh6P54276 Cep57l1-210ENSMUST00000190022 1949 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Msh6P54276 Gm6185-202ENSMUST00000212885 2692 ntTSL 5 BASIC9.57□□□□□ -0.88
Msh6P54276 Tpx2-202ENSMUST00000109816 3483 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Msh6P54276 Heatr5b-201ENSMUST00000097281 6437 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Msh6P54276 Pcdh15-216ENSMUST00000131724 6322 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Msh6P54276 Zfp942-202ENSMUST00000091879 3265 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Msh6P54276 Gm43571-201ENSMUST00000200067 3098 ntBASIC9.57□□□□□ -0.88
Msh6P54276 Mybpc2-201ENSMUST00000165208 3611 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Msh6P54276 Mtif2-201ENSMUST00000020749 2425 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Msh6P54276 Obox6-201ENSMUST00000108513 1344 ntAPPRIS P1 TSL 3 BASIC9.57□□□□□ -0.88
Msh6P54276 C5ar2-201ENSMUST00000098792 3429 ntAPPRIS P5 TSL 1 (best) BASIC9.57□□□□□ -0.88
Msh6P54276 Tmem106b-201ENSMUST00000031556 6002 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Msh6P54276 AC155270.1-201ENSMUST00000221626 4028 ntBASIC9.56□□□□□ -0.88
Msh6P54276 Exoc3-201ENSMUST00000035934 4922 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Msh6P54276 Vmn1r26-203ENSMUST00000228070 4419 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
Msh6P54276 Nemp1-201ENSMUST00000048099 6002 ntAPPRIS P2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Msh6P54276 Acox3-210ENSMUST00000202266 3501 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Msh6P54276 AC165260.6-204ENSMUST00000225571 3508 ntBASIC9.56□□□□□ -0.88
Msh6P54276 Adhfe1-203ENSMUST00000144177 3239 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Msh6P54276 Cyp24a1-201ENSMUST00000038824 3560 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Msh6P54276 Igkv14-126-201ENSMUST00000103310 358 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
Msh6P54276 Gm16140-201ENSMUST00000117191 1060 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Msh6P54276 Gm6743-201ENSMUST00000117345 1066 ntBASIC9.56□□□□□ -0.88
Msh6P54276 Gm12104-201ENSMUST00000120359 979 ntBASIC9.56□□□□□ -0.88
Msh6P54276 Gm11895-201ENSMUST00000122165 467 ntBASIC9.56□□□□□ -0.88
Msh6P54276 Gm14155-201ENSMUST00000127230 587 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Msh6P54276 2410003L11Rik-202ENSMUST00000145262 642 ntTSL 3 BASIC9.56□□□□□ -0.88
Msh6P54276 Gm22533-201ENSMUST00000158821 274 ntBASIC9.56□□□□□ -0.88
Msh6P54276 Atxn3-205ENSMUST00000161011 1000 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Msh6P54276 Cyp2c53-ps-201ENSMUST00000175649 897 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Msh6P54276 Fcer1a-202ENSMUST00000193017 826 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Msh6P54276 Gm3549-201ENSMUST00000203873 794 ntBASIC9.56□□□□□ -0.88
Msh6P54276 Gm44856-201ENSMUST00000206639 304 ntBASIC9.56□□□□□ -0.88
Msh6P54276 Gm5086-201ENSMUST00000210022 1297 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Msh6P54276 Gm39158-201ENSMUST00000210178 856 ntTSL 3 BASIC9.56□□□□□ -0.88
Msh6P54276 AC192091.1-201ENSMUST00000218668 439 ntBASIC9.56□□□□□ -0.88
Msh6P54276 Gm5791-201ENSMUST00000220840 489 ntBASIC9.56□□□□□ -0.88
Msh6P54276 AC108947.1-201ENSMUST00000224274 1000 ntBASIC9.56□□□□□ -0.88
Msh6P54276 AC161275.1-201ENSMUST00000224668 208 ntBASIC9.56□□□□□ -0.88
Msh6P54276 Psmf1-201ENSMUST00000042452 3809 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Msh6P54276 Olfr600-201ENSMUST00000056222 948 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
Msh6P54276 Rps19-ps4-201ENSMUST00000091925 438 ntBASIC9.56□□□□□ -0.88
Msh6P54276 Sult2a3-201ENSMUST00000098809 1018 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Msh6P54276 Mpdz-201ENSMUST00000102830 7512 ntAPPRIS P2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Msh6P54276 Kars-ps1-201ENSMUST00000122077 1767 ntBASIC9.56□□□□□ -0.88
Msh6P54276 Pum1-203ENSMUST00000097864 4017 ntAPPRIS ALT1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Msh6P54276 Ikbkg-202ENSMUST00000064407 4530 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
Msh6P54276 Grik2-205ENSMUST00000218598 3245 ntTSL 5 BASIC9.56□□□□□ -0.88
Msh6P54276 Hsf2bp-201ENSMUST00000002145 2867 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Msh6P54276 Gm28819-202ENSMUST00000187416 1335 ntTSL 5 BASIC9.56□□□□□ -0.88
Msh6P54276 Ppp2r3a-202ENSMUST00000075941 6786 ntTSL 5 BASIC9.56□□□□□ -0.88
Msh6P54276 Vmn2r114-201ENSMUST00000168033 2571 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Msh6P54276 4930517E11Rik-201ENSMUST00000129584 1457 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Msh6P54276 Gm5118-201ENSMUST00000184692 2203 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Msh6P54276 Gm42678-201ENSMUST00000197163 2221 ntBASIC9.55□□□□□ -0.88
Msh6P54276 CT010453.1-201ENSMUST00000226795 2201 ntBASIC9.55□□□□□ -0.88
Msh6P54276 Lyrm1-205ENSMUST00000207270 5845 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Msh6P54276 Cntn5-204ENSMUST00000162484 3606 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Msh6P54276 Epb41l5-203ENSMUST00000163147 3370 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Msh6P54276 Gm22426-201ENSMUST00000103811 96 ntBASIC9.55□□□□□ -0.88
Msh6P54276 Fate1-202ENSMUST00000114569 1053 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Msh6P54276 Fam107b-204ENSMUST00000115054 601 ntAPPRIS P1 TSL 3 BASIC9.55□□□□□ -0.88
Msh6P54276 Gm16357-201ENSMUST00000144091 474 ntBASIC9.55□□□□□ -0.88
Msh6P54276 1700021L23Rik-201ENSMUST00000153719 726 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Msh6P54276 Gm24157-201ENSMUST00000175265 111 ntBASIC9.55□□□□□ -0.88
Msh6P54276 Smpx-208ENSMUST00000190091 1087 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Msh6P54276 Gm2814-201ENSMUST00000207074 1277 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Msh6P54276 Gm45478-201ENSMUST00000209472 211 ntBASIC9.55□□□□□ -0.88
Msh6P54276 Tecr-214ENSMUST00000212990 648 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Msh6P54276 Gm17611-202ENSMUST00000220613 814 ntBASIC9.55□□□□□ -0.88
Msh6P54276 Gm7240-202ENSMUST00000221961 353 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Msh6P54276 CT009550.2-201ENSMUST00000228851 399 ntBASIC9.55□□□□□ -0.88
Msh6P54276 Clec4a2-201ENSMUST00000032248 1261 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Msh6P54276 Fate1-201ENSMUST00000066116 938 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Msh6P54276 Reg1-201ENSMUST00000079926 769 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Msh6P54276 Gm20302-201ENSMUST00000080671 275 ntBASIC9.55□□□□□ -0.88
Msh6P54276 Olfr633-201ENSMUST00000098188 939 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Msh6P54276 Nrxn3-210ENSMUST00000167887 3303 ntTSL 5 BASIC9.55□□□□□ -0.88
Msh6P54276 Lcorl-201ENSMUST00000016026 4884 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Msh6P54276 Slc38a2-201ENSMUST00000023099 4626 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Msh6P54276 Tmc2-201ENSMUST00000077988 3216 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Msh6P54276 Add1-205ENSMUST00000114340 3761 ntAPPRIS P3 TSL 5 BASIC9.55□□□□□ -0.88
Msh6P54276 Cxcr4-201ENSMUST00000052172 1805 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Msh6P54276 Dnmbp-203ENSMUST00000212048 4186 ntTSL 5 BASIC9.55□□□□□ -0.88
Msh6P54276 Gm26720-201ENSMUST00000181260 3538 ntTSL 5 BASIC9.55□□□□□ -0.88
Msh6P54276 Ubn2-205ENSMUST00000160583 14644 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Msh6P54276 5033425B01Rik-201ENSMUST00000213948 1303 ntBASIC9.55□□□□□ -0.88
Msh6P54276 Zbtb37-206ENSMUST00000172044 3883 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Msh6P54276 Ddx18-201ENSMUST00000001724 2258 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Msh6P54276 Gm44165-201ENSMUST00000203093 1469 ntBASIC9.55□□□□□ -0.88
Msh6P54276 Pcm1-201ENSMUST00000045218 6624 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Msh6P54276 Atxn7l1-201ENSMUST00000077456 1624 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Msh6P54276 Otud7b-203ENSMUST00000098849 8046 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Msh6P54276 Olfr1246-202ENSMUST00000213221 5338 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 69.6 ms