Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm7560-201ENSMUST00000187748 873 ntBASIC6.08□□□□□ -1.44
Hmgb3O54879 Gm37904-201ENSMUST00000195591 312 ntBASIC6.08□□□□□ -1.44
Hmgb3O54879 Gm43555-201ENSMUST00000196588 310 ntBASIC6.08□□□□□ -1.44
Hmgb3O54879 Gm23786-202ENSMUST00000200181 119 ntBASIC6.08□□□□□ -1.44
Hmgb3O54879 Tpi-rs11-201ENSMUST00000202145 310 ntBASIC6.08□□□□□ -1.44
Hmgb3O54879 D830044I16Rik-205ENSMUST00000206296 845 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
Hmgb3O54879 Prmt1-214ENSMUST00000209124 741 ntTSL 5 BASIC6.08□□□□□ -1.44
Hmgb3O54879 Mrpl23-207ENSMUST00000210803 590 ntTSL 3 BASIC6.08□□□□□ -1.44
Hmgb3O54879 4930550C14Rik-204ENSMUST00000217318 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Hmgb3O54879 AC163667.2-201ENSMUST00000223769 791 ntBASIC6.08□□□□□ -1.44
Hmgb3O54879 Arhgef38-201ENSMUST00000054105 814 ntTSL 5 BASIC6.08□□□□□ -1.44
Hmgb3O54879 Tmsb15b2-201ENSMUST00000069803 450 ntTSL 2 BASIC6.08□□□□□ -1.44
Hmgb3O54879 Gm26132-201ENSMUST00000083166 148 ntBASIC6.08□□□□□ -1.44
Hmgb3O54879 Snora57-201ENSMUST00000093658 148 ntBASIC6.08□□□□□ -1.44
Hmgb3O54879 Gm26575-201ENSMUST00000181714 2232 ntBASIC6.08□□□□□ -1.44
Hmgb3O54879 Tpte-201ENSMUST00000077194 2549 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Hmgb3O54879 Rabep1-202ENSMUST00000081362 2469 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Hmgb3O54879 Gm44186-201ENSMUST00000204118 2752 ntBASIC6.08□□□□□ -1.44
Hmgb3O54879 Il18rap-201ENSMUST00000027237 4889 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Hmgb3O54879 Rps15a-204ENSMUST00000131374 5179 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Hmgb3O54879 Trim43c-202ENSMUST00000186363 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Hmgb3O54879 Zscan18-201ENSMUST00000046245 3626 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Hmgb3O54879 Ankub1-201ENSMUST00000099091 2696 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Hmgb3O54879 Gm11639-203ENSMUST00000212287 17665 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Hmgb3O54879 Gm5903-201ENSMUST00000121836 2325 ntBASIC6.08□□□□□ -1.44
Hmgb3O54879 Unc13c-201ENSMUST00000075245 6633 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Hmgb3O54879 Nlrp3-202ENSMUST00000101148 4021 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Hmgb3O54879 Gm26545-201ENSMUST00000181082 1746 ntTSL 5 BASIC6.08□□□□□ -1.44
Hmgb3O54879 Psd3-203ENSMUST00000093468 1739 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
Hmgb3O54879 Gm45528-201ENSMUST00000209854 3145 ntBASIC6.08□□□□□ -1.44
Hmgb3O54879 2700049A03Rik-201ENSMUST00000045907 4507 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Hmgb3O54879 Herc2-203ENSMUST00000205303 14403 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
Hmgb3O54879 Pcdh15-227ENSMUST00000152655 3860 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Hmgb3O54879 Gm26807-201ENSMUST00000181132 4363 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Hmgb3O54879 Tbc1d24-213ENSMUST00000201805 3806 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Hmgb3O54879 Dst-209ENSMUST00000182697 2704 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Hmgb3O54879 Zfp607b-202ENSMUST00000120004 4612 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Hmgb3O54879 Olfr204-202ENSMUST00000216261 5371 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
Hmgb3O54879 Kyat3-202ENSMUST00000106218 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Hmgb3O54879 Pard3bos1-202ENSMUST00000138535 1878 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Hmgb3O54879 Cpne3-201ENSMUST00000029885 5648 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Hmgb3O54879 Usp40-204ENSMUST00000187758 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Hmgb3O54879 Glrx-204ENSMUST00000223120 1333 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Hmgb3O54879 Hipk3-203ENSMUST00000111125 3651 ntTSL 5 BASIC6.07□□□□□ -1.44
Hmgb3O54879 Ighj1-201ENSMUST00000103430 53 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Hmgb3O54879 Gm12844-201ENSMUST00000119463 582 ntBASIC6.07□□□□□ -1.44
Hmgb3O54879 Gm13680-201ENSMUST00000119790 793 ntBASIC6.07□□□□□ -1.44
Hmgb3O54879 Gm11474-201ENSMUST00000120814 277 ntBASIC6.07□□□□□ -1.44
Hmgb3O54879 Gm8682-201ENSMUST00000121310 498 ntBASIC6.07□□□□□ -1.44
Hmgb3O54879 Gm12634-201ENSMUST00000122157 992 ntBASIC6.07□□□□□ -1.44
Hmgb3O54879 Crem-229ENSMUST00000151084 957 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Hmgb3O54879 Eif5a-212ENSMUST00000153652 840 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Hmgb3O54879 Gm16554-201ENSMUST00000159471 460 ntTSL 3 BASIC6.07□□□□□ -1.44
Hmgb3O54879 Gm7162-201ENSMUST00000161205 1024 ntBASIC6.07□□□□□ -1.44
Hmgb3O54879 Paip1-206ENSMUST00000173627 1233 ntTSL 5 BASIC6.07□□□□□ -1.44
Hmgb3O54879 Gm20765-201ENSMUST00000177792 795 ntAPPRIS P2 BASIC6.07□□□□□ -1.44
Hmgb3O54879 Gm21312-201ENSMUST00000179258 795 ntAPPRIS P2 BASIC6.07□□□□□ -1.44
Hmgb3O54879 Peak1os-201ENSMUST00000181444 1264 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Hmgb3O54879 Gm28193-201ENSMUST00000189863 615 ntBASIC6.07□□□□□ -1.44
Hmgb3O54879 Spata45-202ENSMUST00000192151 443 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Hmgb3O54879 Gm7442-201ENSMUST00000197778 383 ntBASIC6.07□□□□□ -1.44
Hmgb3O54879 Gm43690-201ENSMUST00000201213 266 ntBASIC6.07□□□□□ -1.44
Hmgb3O54879 Olfr209-202ENSMUST00000208246 428 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Hmgb3O54879 AC163354.1-202ENSMUST00000221460 656 ntTSL 5 BASIC6.07□□□□□ -1.44
Hmgb3O54879 AC139323.1-201ENSMUST00000223370 1040 ntBASIC6.07□□□□□ -1.44
Hmgb3O54879 AC160930.2-201ENSMUST00000226608 303 ntBASIC6.07□□□□□ -1.44
Hmgb3O54879 Glycam1-203ENSMUST00000228060 528 ntAPPRIS ALT2 BASIC6.07□□□□□ -1.44
Hmgb3O54879 AC122877.1-201ENSMUST00000228873 218 ntBASIC6.07□□□□□ -1.44
Hmgb3O54879 Klk1b11-201ENSMUST00000007156 863 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Hmgb3O54879 Clec3a-201ENSMUST00000009018 591 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Hmgb3O54879 E430024I08Rik-202ENSMUST00000220632 1513 ntTSL 5 BASIC6.07□□□□□ -1.44
Hmgb3O54879 Gm43670-201ENSMUST00000199047 1767 ntBASIC6.07□□□□□ -1.44
Hmgb3O54879 CT009711.1-201ENSMUST00000223992 3040 ntBASIC6.07□□□□□ -1.44
Hmgb3O54879 Olfr845-202ENSMUST00000213344 3530 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Hmgb3O54879 Atp1a4-201ENSMUST00000111243 3470 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Hmgb3O54879 Gm5702-201ENSMUST00000185629 2469 ntBASIC6.07□□□□□ -1.44
Hmgb3O54879 Olfr435-202ENSMUST00000215565 2491 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Hmgb3O54879 Gm42478-201ENSMUST00000199252 1467 ntBASIC6.07□□□□□ -1.44
Hmgb3O54879 Serpinb1b-201ENSMUST00000016951 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Hmgb3O54879 Pvt1-202ENSMUST00000181416 3319 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Hmgb3O54879 Pcdh11x-203ENSMUST00000113364 4454 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
Hmgb3O54879 Gm43181-201ENSMUST00000197001 2072 ntBASIC6.06□□□□□ -1.44
Hmgb3O54879 AC166159.1-201ENSMUST00000227154 1380 ntBASIC6.06□□□□□ -1.44
Hmgb3O54879 Slc6a14-201ENSMUST00000033414 3434 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Hmgb3O54879 Fmn1-209ENSMUST00000161731 4262 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Hmgb3O54879 CU024890.1-201ENSMUST00000221361 2019 ntBASIC6.06□□□□□ -1.44
Hmgb3O54879 Galnt15-202ENSMUST00000164208 3563 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Hmgb3O54879 T2-201ENSMUST00000163578 1755 ntTSL 5 BASIC6.06□□□□□ -1.44
Hmgb3O54879 Olfr449-202ENSMUST00000204072 1974 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
Hmgb3O54879 Scyl3-203ENSMUST00000161908 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Hmgb3O54879 4921515L22Rik-201ENSMUST00000218993 1537 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Hmgb3O54879 Olfr62-201ENSMUST00000102666 949 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Hmgb3O54879 Gcg-201ENSMUST00000102733 1088 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Hmgb3O54879 Ighv1-62-3-201ENSMUST00000103532 405 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Hmgb3O54879 Gm24257-201ENSMUST00000104472 131 ntBASIC6.06□□□□□ -1.44
Hmgb3O54879 Cep41-202ENSMUST00000115130 485 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Hmgb3O54879 Eloc-201ENSMUST00000115352 960 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Hmgb3O54879 Gm8688-201ENSMUST00000118240 969 ntBASIC6.06□□□□□ -1.44
Hmgb3O54879 Gm14528-201ENSMUST00000120615 231 ntBASIC6.06□□□□□ -1.44
Hmgb3O54879 Gm12692-201ENSMUST00000121092 546 ntBASIC6.06□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms