Protein–RNA interactions for Protein: G3UXB3

Nkx1-1, NK1 homeobox 1, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-1G3UXB3 Tmem144-202ENSMUST00000168038 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx1-1G3UXB3 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx1-1G3UXB3 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Nkx1-1G3UXB3 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx1-1G3UXB3 Olfr1052-203ENSMUST00000217166 1694 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Nkx1-1G3UXB3 Gm37776-201ENSMUST00000193471 2497 ntBASIC10.82□□□□□ -0.68
Nkx1-1G3UXB3 Gm45496-201ENSMUST00000209918 2917 ntBASIC10.82□□□□□ -0.68
Nkx1-1G3UXB3 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx1-1G3UXB3 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC10.82□□□□□ -0.68
Nkx1-1G3UXB3 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx1-1G3UXB3 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx1-1G3UXB3 Gm34923-201ENSMUST00000222673 5043 ntTSL 5 BASIC10.82□□□□□ -0.68
Nkx1-1G3UXB3 Smad9-201ENSMUST00000029371 5368 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx1-1G3UXB3 Trav9-1-201ENSMUST00000103581 398 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Nkx1-1G3UXB3 Trav9-4-201ENSMUST00000103662 395 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Nkx1-1G3UXB3 Gm17151-201ENSMUST00000105760 367 ntTSL 3 BASIC10.82□□□□□ -0.68
Nkx1-1G3UXB3 Tsacc-201ENSMUST00000010682 481 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx1-1G3UXB3 Gm11936-201ENSMUST00000118323 160 ntBASIC10.82□□□□□ -0.68
Nkx1-1G3UXB3 Gm11703-201ENSMUST00000118352 483 ntBASIC10.82□□□□□ -0.68
Nkx1-1G3UXB3 Gm11972-201ENSMUST00000118514 389 ntBASIC10.82□□□□□ -0.68
Nkx1-1G3UXB3 Uqcc2-202ENSMUST00000118613 426 ntTSL 3 BASIC10.82□□□□□ -0.68
Nkx1-1G3UXB3 Gm14541-201ENSMUST00000118985 157 ntBASIC10.82□□□□□ -0.68
Nkx1-1G3UXB3 Gm12411-201ENSMUST00000119140 483 ntBASIC10.82□□□□□ -0.68
Nkx1-1G3UXB3 Gm15921-201ENSMUST00000119542 483 ntBASIC10.82□□□□□ -0.68
Nkx1-1G3UXB3 Gm11338-201ENSMUST00000120086 1160 ntBASIC10.82□□□□□ -0.68
Nkx1-1G3UXB3 Gm12691-201ENSMUST00000120186 456 ntBASIC10.82□□□□□ -0.68
Nkx1-1G3UXB3 Gm13370-201ENSMUST00000121309 483 ntBASIC10.82□□□□□ -0.68
Nkx1-1G3UXB3 Gm15682-201ENSMUST00000121563 483 ntBASIC10.82□□□□□ -0.68
Nkx1-1G3UXB3 Gm11209-201ENSMUST00000130206 431 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx1-1G3UXB3 Gm10163-201ENSMUST00000155008 481 ntBASIC10.82□□□□□ -0.68
Nkx1-1G3UXB3 Gm22206-201ENSMUST00000158612 116 ntBASIC10.82□□□□□ -0.68
Nkx1-1G3UXB3 Wfdc15b-203ENSMUST00000164567 497 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Nkx1-1G3UXB3 Gm17121-201ENSMUST00000170414 847 ntBASIC10.82□□□□□ -0.68
Nkx1-1G3UXB3 Rab26os-202ENSMUST00000176921 298 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx1-1G3UXB3 Gm20625-201ENSMUST00000177065 698 ntTSL 3 BASIC10.82□□□□□ -0.68
Nkx1-1G3UXB3 Trav9d-1-201ENSMUST00000178426 337 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Nkx1-1G3UXB3 Gm16416-201ENSMUST00000179660 483 ntBASIC10.82□□□□□ -0.68
Nkx1-1G3UXB3 Gm17222-201ENSMUST00000180135 847 ntBASIC10.82□□□□□ -0.68
Nkx1-1G3UXB3 1810041H14Rik-203ENSMUST00000187773 416 ntTSL 5 BASIC10.82□□□□□ -0.68
Nkx1-1G3UXB3 Gm29018-202ENSMUST00000191356 313 ntTSL 3 BASIC10.82□□□□□ -0.68
Nkx1-1G3UXB3 Ighv5-19-201ENSMUST00000193466 297 ntBASIC10.82□□□□□ -0.68
Nkx1-1G3UXB3 Rpl21-ps1-201ENSMUST00000193804 480 ntBASIC10.82□□□□□ -0.68
Nkx1-1G3UXB3 Gm2404-201ENSMUST00000196197 844 ntBASIC10.82□□□□□ -0.68
Nkx1-1G3UXB3 Gm4478-201ENSMUST00000218322 483 ntBASIC10.82□□□□□ -0.68
Nkx1-1G3UXB3 AC147782.1-201ENSMUST00000219169 475 ntBASIC10.82□□□□□ -0.68
Nkx1-1G3UXB3 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Nkx1-1G3UXB3 AC154693.1-201ENSMUST00000223821 523 ntBASIC10.82□□□□□ -0.68
Nkx1-1G3UXB3 CT009711.4-201ENSMUST00000225685 198 ntBASIC10.82□□□□□ -0.68
Nkx1-1G3UXB3 CT030662.3-201ENSMUST00000228751 476 ntBASIC10.82□□□□□ -0.68
Nkx1-1G3UXB3 Rpl21-ps10-201ENSMUST00000071237 480 ntBASIC10.82□□□□□ -0.68
Nkx1-1G3UXB3 Rpl21-ps11-201ENSMUST00000077278 480 ntBASIC10.82□□□□□ -0.68
Nkx1-1G3UXB3 Gm23628-201ENSMUST00000082464 173 ntBASIC10.82□□□□□ -0.68
Nkx1-1G3UXB3 Gm10240-201ENSMUST00000089785 483 ntBASIC10.82□□□□□ -0.68
Nkx1-1G3UXB3 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx1-1G3UXB3 Olfr605-202ENSMUST00000215417 2921 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Nkx1-1G3UXB3 Gk2-201ENSMUST00000059657 1880 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Nkx1-1G3UXB3 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx1-1G3UXB3 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx1-1G3UXB3 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx1-1G3UXB3 Diexf-201ENSMUST00000085555 5570 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx1-1G3UXB3 Txk-201ENSMUST00000113604 2260 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx1-1G3UXB3 Duxbl1-201ENSMUST00000049793 2266 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx1-1G3UXB3 Frmd6-201ENSMUST00000057859 4662 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx1-1G3UXB3 1810046K07Rik-201ENSMUST00000039959 1318 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx1-1G3UXB3 Gm136-201ENSMUST00000095129 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx1-1G3UXB3 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx1-1G3UXB3 Dnajc14-202ENSMUST00000217745 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx1-1G3UXB3 Gm6634-201ENSMUST00000180497 1804 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx1-1G3UXB3 Irgm1-202ENSMUST00000097271 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx1-1G3UXB3 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Nkx1-1G3UXB3 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx1-1G3UXB3 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC10.81□□□□□ -0.68
Nkx1-1G3UXB3 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx1-1G3UXB3 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx1-1G3UXB3 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Nkx1-1G3UXB3 Gm16387-201ENSMUST00000180990 2632 ntBASIC10.81□□□□□ -0.68
Nkx1-1G3UXB3 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC10.81□□□□□ -0.68
Nkx1-1G3UXB3 Olfr508-201ENSMUST00000072914 1635 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Nkx1-1G3UXB3 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx1-1G3UXB3 Hotair-201ENSMUST00000151949 2006 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx1-1G3UXB3 Spata16-201ENSMUST00000047005 2022 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx1-1G3UXB3 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx1-1G3UXB3 Olfr26-201ENSMUST00000104874 931 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Nkx1-1G3UXB3 Ghrh-202ENSMUST00000109536 503 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx1-1G3UXB3 S100a9-202ENSMUST00000117167 519 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx1-1G3UXB3 Gm13866-201ENSMUST00000118901 968 ntBASIC10.81□□□□□ -0.68
Nkx1-1G3UXB3 Gm14470-201ENSMUST00000119085 466 ntBASIC10.81□□□□□ -0.68
Nkx1-1G3UXB3 Olfr213-201ENSMUST00000121958 984 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Nkx1-1G3UXB3 Gm12976-202ENSMUST00000153817 412 ntTSL 3 BASIC10.81□□□□□ -0.68
Nkx1-1G3UXB3 Gm10680-201ENSMUST00000156612 702 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx1-1G3UXB3 Gm9568-201ENSMUST00000182514 1008 ntBASIC10.81□□□□□ -0.68
Nkx1-1G3UXB3 Gm5787-201ENSMUST00000183049 1038 ntBASIC10.81□□□□□ -0.68
Nkx1-1G3UXB3 Ighv13-2-202ENSMUST00000183954 302 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Nkx1-1G3UXB3 1700019D03Rik-204ENSMUST00000186266 623 ntAPPRIS P1 TSL 3 BASIC10.81□□□□□ -0.68
Nkx1-1G3UXB3 Gm28087-201ENSMUST00000189195 767 ntTSL 5 BASIC10.81□□□□□ -0.68
Nkx1-1G3UXB3 Gm45616-201ENSMUST00000211711 319 ntBASIC10.81□□□□□ -0.68
Nkx1-1G3UXB3 Gm20234-201ENSMUST00000214134 717 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx1-1G3UXB3 CT025606.1-201ENSMUST00000218273 324 ntBASIC10.81□□□□□ -0.68
Nkx1-1G3UXB3 AC079681.1-201ENSMUST00000219437 639 ntTSL 3 BASIC10.81□□□□□ -0.68
Nkx1-1G3UXB3 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 89.7 ms