Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Smarcb1Q9Z0H3 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC19.24■□□□□ 0.67
Smarcb1Q9Z0H3 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC19.24■□□□□ 0.67
Smarcb1Q9Z0H3 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smarcb1Q9Z0H3 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smarcb1Q9Z0H3 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smarcb1Q9Z0H3 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.24■□□□□ 0.67
Smarcb1Q9Z0H3 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smarcb1Q9Z0H3 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smarcb1Q9Z0H3 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smarcb1Q9Z0H3 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smarcb1Q9Z0H3 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smarcb1Q9Z0H3 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smarcb1Q9Z0H3 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smarcb1Q9Z0H3 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Smarcb1Q9Z0H3 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smarcb1Q9Z0H3 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smarcb1Q9Z0H3 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Smarcb1Q9Z0H3 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Smarcb1Q9Z0H3 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smarcb1Q9Z0H3 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smarcb1Q9Z0H3 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
Smarcb1Q9Z0H3 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.22■□□□□ 0.67
Smarcb1Q9Z0H3 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Smarcb1Q9Z0H3 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC19.22■□□□□ 0.67
Smarcb1Q9Z0H3 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Smarcb1Q9Z0H3 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
Smarcb1Q9Z0H3 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC19.22■□□□□ 0.67
Smarcb1Q9Z0H3 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Smarcb1Q9Z0H3 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Smarcb1Q9Z0H3 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Smarcb1Q9Z0H3 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
Smarcb1Q9Z0H3 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC19.21■□□□□ 0.67
Smarcb1Q9Z0H3 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Smarcb1Q9Z0H3 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smarcb1Q9Z0H3 Gm13158-201ENSMUST00000122007 736 ntBASIC19.21■□□□□ 0.67
Smarcb1Q9Z0H3 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Smarcb1Q9Z0H3 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC19.21■□□□□ 0.67
Smarcb1Q9Z0H3 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.21■□□□□ 0.67
Smarcb1Q9Z0H3 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smarcb1Q9Z0H3 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smarcb1Q9Z0H3 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smarcb1Q9Z0H3 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smarcb1Q9Z0H3 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.21■□□□□ 0.66
Smarcb1Q9Z0H3 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Smarcb1Q9Z0H3 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Smarcb1Q9Z0H3 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Smarcb1Q9Z0H3 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smarcb1Q9Z0H3 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smarcb1Q9Z0H3 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smarcb1Q9Z0H3 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smarcb1Q9Z0H3 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smarcb1Q9Z0H3 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smarcb1Q9Z0H3 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smarcb1Q9Z0H3 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smarcb1Q9Z0H3 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smarcb1Q9Z0H3 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Smarcb1Q9Z0H3 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smarcb1Q9Z0H3 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC19.19■□□□□ 0.66
Smarcb1Q9Z0H3 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC19.19■□□□□ 0.66
Smarcb1Q9Z0H3 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smarcb1Q9Z0H3 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smarcb1Q9Z0H3 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC19.19■□□□□ 0.66
Smarcb1Q9Z0H3 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Smarcb1Q9Z0H3 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Smarcb1Q9Z0H3 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smarcb1Q9Z0H3 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smarcb1Q9Z0H3 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smarcb1Q9Z0H3 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smarcb1Q9Z0H3 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smarcb1Q9Z0H3 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
Smarcb1Q9Z0H3 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC19.18■□□□□ 0.66
Smarcb1Q9Z0H3 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smarcb1Q9Z0H3 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smarcb1Q9Z0H3 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smarcb1Q9Z0H3 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Smarcb1Q9Z0H3 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smarcb1Q9Z0H3 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Smarcb1Q9Z0H3 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC19.17■□□□□ 0.66
Smarcb1Q9Z0H3 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smarcb1Q9Z0H3 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Smarcb1Q9Z0H3 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smarcb1Q9Z0H3 Gm11927-201ENSMUST00000118472 759 ntBASIC19.17■□□□□ 0.66
Smarcb1Q9Z0H3 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
Smarcb1Q9Z0H3 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smarcb1Q9Z0H3 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC19.17■□□□□ 0.66
Smarcb1Q9Z0H3 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Smarcb1Q9Z0H3 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Smarcb1Q9Z0H3 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smarcb1Q9Z0H3 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smarcb1Q9Z0H3 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
Smarcb1Q9Z0H3 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Smarcb1Q9Z0H3 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smarcb1Q9Z0H3 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smarcb1Q9Z0H3 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smarcb1Q9Z0H3 Nrn1-203ENSMUST00000223611 1443 ntBASIC19.17■□□□□ 0.66
Smarcb1Q9Z0H3 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Smarcb1Q9Z0H3 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smarcb1Q9Z0H3 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smarcb1Q9Z0H3 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 11.8 ms