Protein–RNA interactions for Protein: Q9R1R0

Lhx6, LIM/homeobox protein Lhx6, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx6Q9R1R0 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC17.28■□□□□ 0.36
Lhx6Q9R1R0 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lhx6Q9R1R0 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lhx6Q9R1R0 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lhx6Q9R1R0 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Lhx6Q9R1R0 Gm20815-201ENSMUST00000115496 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lhx6Q9R1R0 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC17.28■□□□□ 0.36
Lhx6Q9R1R0 Gm21812-202ENSMUST00000188908 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lhx6Q9R1R0 Gm18666-201ENSMUST00000190039 958 ntBASIC17.28■□□□□ 0.36
Lhx6Q9R1R0 Gm2559-201ENSMUST00000201323 363 ntBASIC17.28■□□□□ 0.36
Lhx6Q9R1R0 AC153937.1-201ENSMUST00000218734 412 ntBASIC17.28■□□□□ 0.36
Lhx6Q9R1R0 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Lhx6Q9R1R0 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lhx6Q9R1R0 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Lhx6Q9R1R0 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lhx6Q9R1R0 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lhx6Q9R1R0 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lhx6Q9R1R0 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lhx6Q9R1R0 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lhx6Q9R1R0 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.27■□□□□ 0.36
Lhx6Q9R1R0 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lhx6Q9R1R0 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lhx6Q9R1R0 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Lhx6Q9R1R0 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lhx6Q9R1R0 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lhx6Q9R1R0 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Lhx6Q9R1R0 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Lhx6Q9R1R0 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Lhx6Q9R1R0 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Lhx6Q9R1R0 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lhx6Q9R1R0 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Lhx6Q9R1R0 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lhx6Q9R1R0 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lhx6Q9R1R0 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Lhx6Q9R1R0 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lhx6Q9R1R0 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lhx6Q9R1R0 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lhx6Q9R1R0 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lhx6Q9R1R0 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Lhx6Q9R1R0 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lhx6Q9R1R0 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lhx6Q9R1R0 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lhx6Q9R1R0 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.25■□□□□ 0.35
Lhx6Q9R1R0 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.25■□□□□ 0.35
Lhx6Q9R1R0 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lhx6Q9R1R0 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC17.25■□□□□ 0.35
Lhx6Q9R1R0 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Lhx6Q9R1R0 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Lhx6Q9R1R0 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lhx6Q9R1R0 Gm10698-201ENSMUST00000182663 604 ntBASIC17.25■□□□□ 0.35
Lhx6Q9R1R0 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
Lhx6Q9R1R0 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lhx6Q9R1R0 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Lhx6Q9R1R0 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lhx6Q9R1R0 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Lhx6Q9R1R0 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Lhx6Q9R1R0 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lhx6Q9R1R0 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lhx6Q9R1R0 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lhx6Q9R1R0 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lhx6Q9R1R0 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.25■□□□□ 0.35
Lhx6Q9R1R0 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lhx6Q9R1R0 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lhx6Q9R1R0 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lhx6Q9R1R0 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lhx6Q9R1R0 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lhx6Q9R1R0 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Lhx6Q9R1R0 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.24■□□□□ 0.35
Lhx6Q9R1R0 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lhx6Q9R1R0 Gm15378-201ENSMUST00000121894 207 ntBASIC17.24■□□□□ 0.35
Lhx6Q9R1R0 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
Lhx6Q9R1R0 Gm38205-201ENSMUST00000192243 258 ntBASIC17.24■□□□□ 0.35
Lhx6Q9R1R0 Gm37035-201ENSMUST00000194809 2148 ntBASIC17.24■□□□□ 0.35
Lhx6Q9R1R0 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lhx6Q9R1R0 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lhx6Q9R1R0 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Lhx6Q9R1R0 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.24■□□□□ 0.35
Lhx6Q9R1R0 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lhx6Q9R1R0 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC17.23■□□□□ 0.35
Lhx6Q9R1R0 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Lhx6Q9R1R0 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lhx6Q9R1R0 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lhx6Q9R1R0 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lhx6Q9R1R0 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.23■□□□□ 0.35
Lhx6Q9R1R0 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lhx6Q9R1R0 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
Lhx6Q9R1R0 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.23■□□□□ 0.35
Lhx6Q9R1R0 Gm13534-201ENSMUST00000121169 513 ntBASIC17.23■□□□□ 0.35
Lhx6Q9R1R0 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
Lhx6Q9R1R0 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.23■□□□□ 0.35
Lhx6Q9R1R0 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Lhx6Q9R1R0 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lhx6Q9R1R0 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lhx6Q9R1R0 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lhx6Q9R1R0 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Lhx6Q9R1R0 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lhx6Q9R1R0 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lhx6Q9R1R0 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.22■□□□□ 0.35
Lhx6Q9R1R0 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Lhx6Q9R1R0 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms