Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.83■□□□□ 0.6
Msh5Q9QUM7 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Msh5Q9QUM7 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Msh5Q9QUM7 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Msh5Q9QUM7 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Msh5Q9QUM7 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.82■□□□□ 0.6
Msh5Q9QUM7 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Msh5Q9QUM7 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.82■□□□□ 0.6
Msh5Q9QUM7 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Msh5Q9QUM7 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Msh5Q9QUM7 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Msh5Q9QUM7 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Msh5Q9QUM7 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Msh5Q9QUM7 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Msh5Q9QUM7 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Msh5Q9QUM7 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Msh5Q9QUM7 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Msh5Q9QUM7 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Msh5Q9QUM7 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Msh5Q9QUM7 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.82■□□□□ 0.6
Msh5Q9QUM7 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Msh5Q9QUM7 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Msh5Q9QUM7 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Msh5Q9QUM7 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Msh5Q9QUM7 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Msh5Q9QUM7 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Msh5Q9QUM7 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Msh5Q9QUM7 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.81■□□□□ 0.6
Msh5Q9QUM7 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Msh5Q9QUM7 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Msh5Q9QUM7 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.81■□□□□ 0.6
Msh5Q9QUM7 Gm21156-201ENSMUST00000189693 869 ntBASIC18.81■□□□□ 0.6
Msh5Q9QUM7 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Msh5Q9QUM7 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Msh5Q9QUM7 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Msh5Q9QUM7 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Msh5Q9QUM7 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Msh5Q9QUM7 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.81■□□□□ 0.6
Msh5Q9QUM7 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Msh5Q9QUM7 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Msh5Q9QUM7 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.81■□□□□ 0.6
Msh5Q9QUM7 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Msh5Q9QUM7 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Msh5Q9QUM7 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Msh5Q9QUM7 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.8■□□□□ 0.6
Msh5Q9QUM7 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Msh5Q9QUM7 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.8■□□□□ 0.6
Msh5Q9QUM7 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.8■□□□□ 0.6
Msh5Q9QUM7 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Msh5Q9QUM7 Grk6-206ENSMUST00000224995 2971 ntBASIC18.8■□□□□ 0.6
Msh5Q9QUM7 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Msh5Q9QUM7 Gm7860-201ENSMUST00000121190 879 ntBASIC18.8■□□□□ 0.6
Msh5Q9QUM7 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Msh5Q9QUM7 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Msh5Q9QUM7 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
Msh5Q9QUM7 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.8■□□□□ 0.6
Msh5Q9QUM7 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.79■□□□□ 0.6
Msh5Q9QUM7 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.79■□□□□ 0.6
Msh5Q9QUM7 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Msh5Q9QUM7 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Msh5Q9QUM7 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Msh5Q9QUM7 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC18.79■□□□□ 0.6
Msh5Q9QUM7 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.79■□□□□ 0.6
Msh5Q9QUM7 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.79■□□□□ 0.6
Msh5Q9QUM7 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Msh5Q9QUM7 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Msh5Q9QUM7 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Msh5Q9QUM7 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Msh5Q9QUM7 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Msh5Q9QUM7 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Msh5Q9QUM7 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Msh5Q9QUM7 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Msh5Q9QUM7 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Msh5Q9QUM7 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Msh5Q9QUM7 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Msh5Q9QUM7 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Msh5Q9QUM7 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Msh5Q9QUM7 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Msh5Q9QUM7 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Msh5Q9QUM7 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Msh5Q9QUM7 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC18.78■□□□□ 0.6
Msh5Q9QUM7 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.78■□□□□ 0.6
Msh5Q9QUM7 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Msh5Q9QUM7 Gm37083-201ENSMUST00000195784 711 ntTSL 2 BASIC18.78■□□□□ 0.6
Msh5Q9QUM7 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC18.78■□□□□ 0.6
Msh5Q9QUM7 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Msh5Q9QUM7 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Msh5Q9QUM7 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Msh5Q9QUM7 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Msh5Q9QUM7 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Msh5Q9QUM7 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Msh5Q9QUM7 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Msh5Q9QUM7 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Msh5Q9QUM7 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Msh5Q9QUM7 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Msh5Q9QUM7 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Msh5Q9QUM7 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Msh5Q9QUM7 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.77■□□□□ 0.6
Msh5Q9QUM7 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Msh5Q9QUM7 Gm9988-201ENSMUST00000069786 435 ntBASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms