Protein–RNA interactions for Protein: Q9EQG9

Col4a3bp, Collagen type IV alpha-3-binding protein, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bpQ9EQG9 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Col4a3bpQ9EQG9 Reep4-203ENSMUST00000226563 1444 ntBASIC21.24■□□□□ 0.99
Col4a3bpQ9EQG9 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Col4a3bpQ9EQG9 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC21.24■□□□□ 0.99
Col4a3bpQ9EQG9 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC21.24■□□□□ 0.99
Col4a3bpQ9EQG9 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC21.24■□□□□ 0.99
Col4a3bpQ9EQG9 AV356131-201ENSMUST00000206201 750 ntBASIC21.24■□□□□ 0.99
Col4a3bpQ9EQG9 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Col4a3bpQ9EQG9 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Col4a3bpQ9EQG9 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Col4a3bpQ9EQG9 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Col4a3bpQ9EQG9 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Col4a3bpQ9EQG9 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Col4a3bpQ9EQG9 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
Col4a3bpQ9EQG9 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC21.23■□□□□ 0.99
Col4a3bpQ9EQG9 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Col4a3bpQ9EQG9 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC21.23■□□□□ 0.99
Col4a3bpQ9EQG9 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Col4a3bpQ9EQG9 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC21.23■□□□□ 0.99
Col4a3bpQ9EQG9 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Col4a3bpQ9EQG9 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Col4a3bpQ9EQG9 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Col4a3bpQ9EQG9 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Col4a3bpQ9EQG9 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Col4a3bpQ9EQG9 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Col4a3bpQ9EQG9 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Col4a3bpQ9EQG9 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC21.22■□□□□ 0.99
Col4a3bpQ9EQG9 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Col4a3bpQ9EQG9 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Col4a3bpQ9EQG9 AC123834.2-201ENSMUST00000224038 2340 ntBASIC21.22■□□□□ 0.99
Col4a3bpQ9EQG9 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Col4a3bpQ9EQG9 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Col4a3bpQ9EQG9 Gm42922-201ENSMUST00000195887 2078 ntBASIC21.21■□□□□ 0.99
Col4a3bpQ9EQG9 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Col4a3bpQ9EQG9 Gm13234-201ENSMUST00000120010 747 ntBASIC21.21■□□□□ 0.99
Col4a3bpQ9EQG9 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Col4a3bpQ9EQG9 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Col4a3bpQ9EQG9 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Col4a3bpQ9EQG9 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Col4a3bpQ9EQG9 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Col4a3bpQ9EQG9 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Col4a3bpQ9EQG9 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Col4a3bpQ9EQG9 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Col4a3bpQ9EQG9 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Col4a3bpQ9EQG9 Gm45906-201ENSMUST00000208911 1430 ntBASIC21.21■□□□□ 0.99
Col4a3bpQ9EQG9 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Col4a3bpQ9EQG9 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC21.2■□□□□ 0.98
Col4a3bpQ9EQG9 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Col4a3bpQ9EQG9 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Col4a3bpQ9EQG9 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Col4a3bpQ9EQG9 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC21.2■□□□□ 0.98
Col4a3bpQ9EQG9 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Col4a3bpQ9EQG9 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Col4a3bpQ9EQG9 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Col4a3bpQ9EQG9 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Col4a3bpQ9EQG9 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Col4a3bpQ9EQG9 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Col4a3bpQ9EQG9 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC21.19■□□□□ 0.98
Col4a3bpQ9EQG9 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Col4a3bpQ9EQG9 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
Col4a3bpQ9EQG9 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Col4a3bpQ9EQG9 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC21.19■□□□□ 0.98
Col4a3bpQ9EQG9 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Col4a3bpQ9EQG9 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Col4a3bpQ9EQG9 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Col4a3bpQ9EQG9 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Col4a3bpQ9EQG9 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Col4a3bpQ9EQG9 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Col4a3bpQ9EQG9 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Col4a3bpQ9EQG9 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Col4a3bpQ9EQG9 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Col4a3bpQ9EQG9 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Col4a3bpQ9EQG9 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Col4a3bpQ9EQG9 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC21.18■□□□□ 0.98
Col4a3bpQ9EQG9 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Col4a3bpQ9EQG9 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Col4a3bpQ9EQG9 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Col4a3bpQ9EQG9 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC21.18■□□□□ 0.98
Col4a3bpQ9EQG9 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Col4a3bpQ9EQG9 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Col4a3bpQ9EQG9 Rarb-207ENSMUST00000225921 2756 ntBASIC21.17■□□□□ 0.98
Col4a3bpQ9EQG9 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Col4a3bpQ9EQG9 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Col4a3bpQ9EQG9 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC21.17■□□□□ 0.98
Col4a3bpQ9EQG9 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Col4a3bpQ9EQG9 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC21.17■□□□□ 0.98
Col4a3bpQ9EQG9 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Col4a3bpQ9EQG9 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Col4a3bpQ9EQG9 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Col4a3bpQ9EQG9 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC21.17■□□□□ 0.98
Col4a3bpQ9EQG9 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Col4a3bpQ9EQG9 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Col4a3bpQ9EQG9 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Col4a3bpQ9EQG9 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Col4a3bpQ9EQG9 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Col4a3bpQ9EQG9 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Col4a3bpQ9EQG9 Gm43182-201ENSMUST00000199476 2528 ntBASIC21.16■□□□□ 0.98
Col4a3bpQ9EQG9 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Col4a3bpQ9EQG9 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Col4a3bpQ9EQG9 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms