Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
Chmp2aQ9DB34 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Chmp2aQ9DB34 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Chmp2aQ9DB34 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Chmp2aQ9DB34 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Chmp2aQ9DB34 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Chmp2aQ9DB34 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chmp2aQ9DB34 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chmp2aQ9DB34 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chmp2aQ9DB34 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Chmp2aQ9DB34 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chmp2aQ9DB34 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chmp2aQ9DB34 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.31■□□□□ 0.68
Chmp2aQ9DB34 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Chmp2aQ9DB34 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chmp2aQ9DB34 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Chmp2aQ9DB34 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chmp2aQ9DB34 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chmp2aQ9DB34 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Chmp2aQ9DB34 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chmp2aQ9DB34 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Chmp2aQ9DB34 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.3■□□□□ 0.68
Chmp2aQ9DB34 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chmp2aQ9DB34 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Chmp2aQ9DB34 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chmp2aQ9DB34 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chmp2aQ9DB34 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Chmp2aQ9DB34 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Chmp2aQ9DB34 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chmp2aQ9DB34 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.3■□□□□ 0.68
Chmp2aQ9DB34 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC19.3■□□□□ 0.68
Chmp2aQ9DB34 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Chmp2aQ9DB34 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chmp2aQ9DB34 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chmp2aQ9DB34 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chmp2aQ9DB34 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.3■□□□□ 0.68
Chmp2aQ9DB34 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chmp2aQ9DB34 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chmp2aQ9DB34 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.29■□□□□ 0.68
Chmp2aQ9DB34 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chmp2aQ9DB34 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Chmp2aQ9DB34 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
Chmp2aQ9DB34 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Chmp2aQ9DB34 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chmp2aQ9DB34 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC19.29■□□□□ 0.68
Chmp2aQ9DB34 Gm29257-201ENSMUST00000186115 639 ntBASIC19.29■□□□□ 0.68
Chmp2aQ9DB34 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.29■□□□□ 0.68
Chmp2aQ9DB34 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chmp2aQ9DB34 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chmp2aQ9DB34 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chmp2aQ9DB34 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Chmp2aQ9DB34 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Chmp2aQ9DB34 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chmp2aQ9DB34 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chmp2aQ9DB34 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chmp2aQ9DB34 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chmp2aQ9DB34 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chmp2aQ9DB34 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Chmp2aQ9DB34 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Chmp2aQ9DB34 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.28■□□□□ 0.68
Chmp2aQ9DB34 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chmp2aQ9DB34 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.28■□□□□ 0.68
Chmp2aQ9DB34 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC19.28■□□□□ 0.68
Chmp2aQ9DB34 Gm6365-201ENSMUST00000054711 744 ntBASIC19.28■□□□□ 0.68
Chmp2aQ9DB34 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Chmp2aQ9DB34 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC19.28■□□□□ 0.68
Chmp2aQ9DB34 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Chmp2aQ9DB34 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chmp2aQ9DB34 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chmp2aQ9DB34 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Chmp2aQ9DB34 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chmp2aQ9DB34 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Chmp2aQ9DB34 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
Chmp2aQ9DB34 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Chmp2aQ9DB34 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Chmp2aQ9DB34 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Chmp2aQ9DB34 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.27■□□□□ 0.68
Chmp2aQ9DB34 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Chmp2aQ9DB34 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Chmp2aQ9DB34 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Chmp2aQ9DB34 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Chmp2aQ9DB34 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
Chmp2aQ9DB34 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Chmp2aQ9DB34 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Chmp2aQ9DB34 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Chmp2aQ9DB34 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Chmp2aQ9DB34 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Chmp2aQ9DB34 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
Chmp2aQ9DB34 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chmp2aQ9DB34 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chmp2aQ9DB34 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chmp2aQ9DB34 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chmp2aQ9DB34 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chmp2aQ9DB34 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chmp2aQ9DB34 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chmp2aQ9DB34 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Chmp2aQ9DB34 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
Chmp2aQ9DB34 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chmp2aQ9DB34 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Chmp2aQ9DB34 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms