Protein–RNA interactions for Protein: Q9D1H0

Rita1, RBPJ-interacting and tubulin-associated protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rita1Q9D1H0 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rita1Q9D1H0 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rita1Q9D1H0 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rita1Q9D1H0 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rita1Q9D1H0 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rita1Q9D1H0 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rita1Q9D1H0 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Rita1Q9D1H0 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rita1Q9D1H0 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rita1Q9D1H0 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rita1Q9D1H0 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.13■□□□□ 0.33
Rita1Q9D1H0 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rita1Q9D1H0 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rita1Q9D1H0 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.12■□□□□ 0.33
Rita1Q9D1H0 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.12■□□□□ 0.33
Rita1Q9D1H0 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rita1Q9D1H0 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.12■□□□□ 0.33
Rita1Q9D1H0 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rita1Q9D1H0 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Rita1Q9D1H0 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rita1Q9D1H0 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rita1Q9D1H0 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rita1Q9D1H0 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rita1Q9D1H0 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rita1Q9D1H0 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rita1Q9D1H0 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rita1Q9D1H0 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rita1Q9D1H0 Gm10653-202ENSMUST00000139570 835 ntBASIC17.11■□□□□ 0.33
Rita1Q9D1H0 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rita1Q9D1H0 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.11■□□□□ 0.33
Rita1Q9D1H0 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rita1Q9D1H0 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rita1Q9D1H0 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rita1Q9D1H0 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rita1Q9D1H0 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rita1Q9D1H0 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.11■□□□□ 0.33
Rita1Q9D1H0 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rita1Q9D1H0 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rita1Q9D1H0 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Rita1Q9D1H0 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rita1Q9D1H0 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Rita1Q9D1H0 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rita1Q9D1H0 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rita1Q9D1H0 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rita1Q9D1H0 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rita1Q9D1H0 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Rita1Q9D1H0 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rita1Q9D1H0 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Rita1Q9D1H0 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rita1Q9D1H0 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rita1Q9D1H0 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rita1Q9D1H0 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rita1Q9D1H0 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rita1Q9D1H0 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rita1Q9D1H0 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rita1Q9D1H0 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rita1Q9D1H0 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Rita1Q9D1H0 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.09■□□□□ 0.33
Rita1Q9D1H0 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rita1Q9D1H0 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rita1Q9D1H0 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rita1Q9D1H0 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rita1Q9D1H0 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rita1Q9D1H0 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rita1Q9D1H0 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.08■□□□□ 0.32
Rita1Q9D1H0 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rita1Q9D1H0 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rita1Q9D1H0 Gm20049-201ENSMUST00000219950 730 ntBASIC17.08■□□□□ 0.32
Rita1Q9D1H0 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.08■□□□□ 0.32
Rita1Q9D1H0 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.08■□□□□ 0.32
Rita1Q9D1H0 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rita1Q9D1H0 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rita1Q9D1H0 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rita1Q9D1H0 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rita1Q9D1H0 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rita1Q9D1H0 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rita1Q9D1H0 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rita1Q9D1H0 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Rita1Q9D1H0 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rita1Q9D1H0 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rita1Q9D1H0 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rita1Q9D1H0 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.07■□□□□ 0.32
Rita1Q9D1H0 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.07■□□□□ 0.32
Rita1Q9D1H0 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rita1Q9D1H0 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.07■□□□□ 0.32
Rita1Q9D1H0 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rita1Q9D1H0 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rita1Q9D1H0 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rita1Q9D1H0 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rita1Q9D1H0 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rita1Q9D1H0 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
Rita1Q9D1H0 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rita1Q9D1H0 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rita1Q9D1H0 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rita1Q9D1H0 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rita1Q9D1H0 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Rita1Q9D1H0 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rita1Q9D1H0 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rita1Q9D1H0 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rita1Q9D1H0 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms