Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim13Q9CYB0 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim13Q9CYB0 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.12■□□□□ 0.33
Trim13Q9CYB0 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim13Q9CYB0 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim13Q9CYB0 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim13Q9CYB0 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim13Q9CYB0 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim13Q9CYB0 Gm10209-201ENSMUST00000203397 1607 ntBASIC17.11■□□□□ 0.33
Trim13Q9CYB0 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim13Q9CYB0 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Trim13Q9CYB0 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim13Q9CYB0 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim13Q9CYB0 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim13Q9CYB0 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC17.11■□□□□ 0.33
Trim13Q9CYB0 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC17.11■□□□□ 0.33
Trim13Q9CYB0 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC17.11■□□□□ 0.33
Trim13Q9CYB0 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim13Q9CYB0 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim13Q9CYB0 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trim13Q9CYB0 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim13Q9CYB0 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.11■□□□□ 0.33
Trim13Q9CYB0 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim13Q9CYB0 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trim13Q9CYB0 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim13Q9CYB0 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Trim13Q9CYB0 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim13Q9CYB0 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim13Q9CYB0 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim13Q9CYB0 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.1■□□□□ 0.33
Trim13Q9CYB0 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim13Q9CYB0 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Trim13Q9CYB0 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC17.1■□□□□ 0.33
Trim13Q9CYB0 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim13Q9CYB0 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim13Q9CYB0 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Trim13Q9CYB0 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Trim13Q9CYB0 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim13Q9CYB0 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim13Q9CYB0 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim13Q9CYB0 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim13Q9CYB0 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trim13Q9CYB0 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim13Q9CYB0 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim13Q9CYB0 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim13Q9CYB0 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.1■□□□□ 0.33
Trim13Q9CYB0 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.09■□□□□ 0.33
Trim13Q9CYB0 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim13Q9CYB0 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Trim13Q9CYB0 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trim13Q9CYB0 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim13Q9CYB0 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim13Q9CYB0 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim13Q9CYB0 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC17.09■□□□□ 0.33
Trim13Q9CYB0 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trim13Q9CYB0 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim13Q9CYB0 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim13Q9CYB0 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim13Q9CYB0 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim13Q9CYB0 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim13Q9CYB0 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Trim13Q9CYB0 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.08■□□□□ 0.33
Trim13Q9CYB0 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim13Q9CYB0 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim13Q9CYB0 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.08■□□□□ 0.32
Trim13Q9CYB0 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim13Q9CYB0 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Trim13Q9CYB0 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim13Q9CYB0 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim13Q9CYB0 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim13Q9CYB0 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim13Q9CYB0 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trim13Q9CYB0 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.07■□□□□ 0.32
Trim13Q9CYB0 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim13Q9CYB0 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim13Q9CYB0 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trim13Q9CYB0 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim13Q9CYB0 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Trim13Q9CYB0 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim13Q9CYB0 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim13Q9CYB0 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Trim13Q9CYB0 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Trim13Q9CYB0 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim13Q9CYB0 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim13Q9CYB0 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim13Q9CYB0 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim13Q9CYB0 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim13Q9CYB0 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trim13Q9CYB0 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Trim13Q9CYB0 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim13Q9CYB0 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC17.06■□□□□ 0.32
Trim13Q9CYB0 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trim13Q9CYB0 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Trim13Q9CYB0 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim13Q9CYB0 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC17.06■□□□□ 0.32
Trim13Q9CYB0 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim13Q9CYB0 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim13Q9CYB0 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trim13Q9CYB0 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim13Q9CYB0 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms