Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC18.41■□□□□ 0.54
Ssu72Q9CY97 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Ssu72Q9CY97 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
Ssu72Q9CY97 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ssu72Q9CY97 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ssu72Q9CY97 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ssu72Q9CY97 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ssu72Q9CY97 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Ssu72Q9CY97 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ssu72Q9CY97 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.4■□□□□ 0.54
Ssu72Q9CY97 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ssu72Q9CY97 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Ssu72Q9CY97 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Ssu72Q9CY97 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ssu72Q9CY97 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Ssu72Q9CY97 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ssu72Q9CY97 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ssu72Q9CY97 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ssu72Q9CY97 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ssu72Q9CY97 Gm27801-201ENSMUST00000184174 223 ntBASIC18.39■□□□□ 0.53
Ssu72Q9CY97 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.39■□□□□ 0.53
Ssu72Q9CY97 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ssu72Q9CY97 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ssu72Q9CY97 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Ssu72Q9CY97 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.39■□□□□ 0.53
Ssu72Q9CY97 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC18.39■□□□□ 0.53
Ssu72Q9CY97 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ssu72Q9CY97 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.39■□□□□ 0.53
Ssu72Q9CY97 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.39■□□□□ 0.53
Ssu72Q9CY97 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ssu72Q9CY97 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ssu72Q9CY97 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ssu72Q9CY97 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ssu72Q9CY97 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ssu72Q9CY97 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ssu72Q9CY97 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.38■□□□□ 0.53
Ssu72Q9CY97 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ssu72Q9CY97 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ssu72Q9CY97 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ssu72Q9CY97 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
Ssu72Q9CY97 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ssu72Q9CY97 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Ssu72Q9CY97 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ssu72Q9CY97 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.37■□□□□ 0.53
Ssu72Q9CY97 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Ssu72Q9CY97 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ssu72Q9CY97 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.37■□□□□ 0.53
Ssu72Q9CY97 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ssu72Q9CY97 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ssu72Q9CY97 Gm12251-201ENSMUST00000117893 792 ntBASIC18.37■□□□□ 0.53
Ssu72Q9CY97 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ssu72Q9CY97 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Ssu72Q9CY97 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ssu72Q9CY97 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
Ssu72Q9CY97 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ssu72Q9CY97 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
Ssu72Q9CY97 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ssu72Q9CY97 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Ssu72Q9CY97 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ssu72Q9CY97 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ssu72Q9CY97 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.36■□□□□ 0.53
Ssu72Q9CY97 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ssu72Q9CY97 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ssu72Q9CY97 Gm14117-201ENSMUST00000122417 843 ntBASIC18.36■□□□□ 0.53
Ssu72Q9CY97 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.36■□□□□ 0.53
Ssu72Q9CY97 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.36■□□□□ 0.53
Ssu72Q9CY97 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.36■□□□□ 0.53
Ssu72Q9CY97 Flvcr1-202ENSMUST00000191946 1216 ntBASIC18.36■□□□□ 0.53
Ssu72Q9CY97 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ssu72Q9CY97 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC18.36■□□□□ 0.53
Ssu72Q9CY97 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ssu72Q9CY97 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Ssu72Q9CY97 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ssu72Q9CY97 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ssu72Q9CY97 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ssu72Q9CY97 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ssu72Q9CY97 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ssu72Q9CY97 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ssu72Q9CY97 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ssu72Q9CY97 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ssu72Q9CY97 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.36■□□□□ 0.53
Ssu72Q9CY97 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.36■□□□□ 0.53
Ssu72Q9CY97 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ssu72Q9CY97 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ssu72Q9CY97 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Ssu72Q9CY97 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ssu72Q9CY97 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ssu72Q9CY97 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.35■□□□□ 0.53
Ssu72Q9CY97 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.35■□□□□ 0.53
Ssu72Q9CY97 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ssu72Q9CY97 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ssu72Q9CY97 Fst-202ENSMUST00000223640 2612 ntBASIC18.35■□□□□ 0.53
Ssu72Q9CY97 Gm11421-201ENSMUST00000122124 294 ntBASIC18.35■□□□□ 0.53
Ssu72Q9CY97 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ssu72Q9CY97 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.35■□□□□ 0.53
Ssu72Q9CY97 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ssu72Q9CY97 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ssu72Q9CY97 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
Ssu72Q9CY97 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ssu72Q9CY97 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms