Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Trex1Q91XB0 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trex1Q91XB0 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trex1Q91XB0 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Trex1Q91XB0 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trex1Q91XB0 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trex1Q91XB0 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trex1Q91XB0 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
Trex1Q91XB0 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Trex1Q91XB0 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Trex1Q91XB0 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Trex1Q91XB0 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Trex1Q91XB0 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Trex1Q91XB0 AC158538.1-201ENSMUST00000225870 294 ntBASIC21.33■■□□□ 1.01
Trex1Q91XB0 AC107452.1-201ENSMUST00000227963 481 ntBASIC21.33■■□□□ 1.01
Trex1Q91XB0 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC21.33■■□□□ 1
Trex1Q91XB0 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC21.32■■□□□ 1
Trex1Q91XB0 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Trex1Q91XB0 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
Trex1Q91XB0 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC21.32■■□□□ 1
Trex1Q91XB0 Alkbh1-212ENSMUST00000185301 408 ntBASIC21.32■■□□□ 1
Trex1Q91XB0 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC21.32■■□□□ 1
Trex1Q91XB0 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Trex1Q91XB0 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Trex1Q91XB0 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Trex1Q91XB0 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Trex1Q91XB0 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC21.32■■□□□ 1
Trex1Q91XB0 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC21.32■■□□□ 1
Trex1Q91XB0 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Trex1Q91XB0 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Trex1Q91XB0 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Trex1Q91XB0 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC21.31■■□□□ 1
Trex1Q91XB0 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC21.31■■□□□ 1
Trex1Q91XB0 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC21.31■■□□□ 1
Trex1Q91XB0 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Trex1Q91XB0 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC21.31■■□□□ 1
Trex1Q91XB0 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Trex1Q91XB0 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Trex1Q91XB0 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC21.31■■□□□ 1
Trex1Q91XB0 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Trex1Q91XB0 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC21.31■■□□□ 1
Trex1Q91XB0 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trex1Q91XB0 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Trex1Q91XB0 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC21.3■■□□□ 1
Trex1Q91XB0 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trex1Q91XB0 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Trex1Q91XB0 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC21.3■■□□□ 1
Trex1Q91XB0 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trex1Q91XB0 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC21.3■■□□□ 1
Trex1Q91XB0 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trex1Q91XB0 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trex1Q91XB0 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC21.29■■□□□ 1
Trex1Q91XB0 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trex1Q91XB0 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC21.29■■□□□ 1
Trex1Q91XB0 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Trex1Q91XB0 CT010444.2-201ENSMUST00000217877 1629 ntBASIC21.29■■□□□ 1
Trex1Q91XB0 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC21.28■■□□□ 1
Trex1Q91XB0 Mir1199-201ENSMUST00000117015 119 ntBASIC21.28■■□□□ 1
Trex1Q91XB0 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC21.28■■□□□ 1
Trex1Q91XB0 Gm22325-201ENSMUST00000158904 308 ntBASIC21.28■■□□□ 1
Trex1Q91XB0 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC21.28■■□□□ 1
Trex1Q91XB0 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC21.28■■□□□ 1
Trex1Q91XB0 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC21.27■■□□□ 1
Trex1Q91XB0 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trex1Q91XB0 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trex1Q91XB0 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.27■■□□□ 1
Trex1Q91XB0 Gm18688-201ENSMUST00000204695 1859 ntBASIC21.27■■□□□ 1
Trex1Q91XB0 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
Trex1Q91XB0 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
Trex1Q91XB0 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC21.27■■□□□ 1
Trex1Q91XB0 Mtag2-201ENSMUST00000058665 714 ntBASIC21.27■■□□□ 1
Trex1Q91XB0 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
Trex1Q91XB0 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Trex1Q91XB0 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.27■□□□□ 0.99
Trex1Q91XB0 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC21.27■□□□□ 0.99
Trex1Q91XB0 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Trex1Q91XB0 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trex1Q91XB0 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trex1Q91XB0 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trex1Q91XB0 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Trex1Q91XB0 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trex1Q91XB0 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trex1Q91XB0 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trex1Q91XB0 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Trex1Q91XB0 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trex1Q91XB0 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trex1Q91XB0 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trex1Q91XB0 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Trex1Q91XB0 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Trex1Q91XB0 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trex1Q91XB0 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Trex1Q91XB0 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trex1Q91XB0 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC21.25■□□□□ 0.99
Trex1Q91XB0 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC21.25■□□□□ 0.99
Trex1Q91XB0 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trex1Q91XB0 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC21.25■□□□□ 0.99
Trex1Q91XB0 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Trex1Q91XB0 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trex1Q91XB0 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Trex1Q91XB0 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms