Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
StrcQ8VIM6 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC22.45■■□□□ 1.19
StrcQ8VIM6 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.19
StrcQ8VIM6 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
StrcQ8VIM6 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
StrcQ8VIM6 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC22.45■■□□□ 1.18
StrcQ8VIM6 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC22.45■■□□□ 1.18
StrcQ8VIM6 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
StrcQ8VIM6 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
StrcQ8VIM6 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC22.45■■□□□ 1.18
StrcQ8VIM6 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
StrcQ8VIM6 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
StrcQ8VIM6 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
StrcQ8VIM6 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC22.44■■□□□ 1.18
StrcQ8VIM6 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
StrcQ8VIM6 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
StrcQ8VIM6 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC22.44■■□□□ 1.18
StrcQ8VIM6 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC22.44■■□□□ 1.18
StrcQ8VIM6 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
StrcQ8VIM6 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
StrcQ8VIM6 Gm9103-201ENSMUST00000119371 405 ntBASIC22.43■■□□□ 1.18
StrcQ8VIM6 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC22.43■■□□□ 1.18
StrcQ8VIM6 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
StrcQ8VIM6 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
StrcQ8VIM6 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC22.43■■□□□ 1.18
StrcQ8VIM6 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
StrcQ8VIM6 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
StrcQ8VIM6 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC22.43■■□□□ 1.18
StrcQ8VIM6 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
StrcQ8VIM6 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC22.43■■□□□ 1.18
StrcQ8VIM6 Mir6349-201ENSMUST00000184059 97 ntBASIC22.43■■□□□ 1.18
StrcQ8VIM6 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC22.42■■□□□ 1.18
StrcQ8VIM6 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
StrcQ8VIM6 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
StrcQ8VIM6 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC22.42■■□□□ 1.18
StrcQ8VIM6 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
StrcQ8VIM6 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
StrcQ8VIM6 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
StrcQ8VIM6 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
StrcQ8VIM6 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
StrcQ8VIM6 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
StrcQ8VIM6 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
StrcQ8VIM6 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC22.42■■□□□ 1.18
StrcQ8VIM6 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
StrcQ8VIM6 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
StrcQ8VIM6 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
StrcQ8VIM6 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
StrcQ8VIM6 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
StrcQ8VIM6 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC22.41■■□□□ 1.18
StrcQ8VIM6 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
StrcQ8VIM6 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
StrcQ8VIM6 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
StrcQ8VIM6 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
StrcQ8VIM6 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
StrcQ8VIM6 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC22.41■■□□□ 1.18
StrcQ8VIM6 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC22.41■■□□□ 1.18
StrcQ8VIM6 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
StrcQ8VIM6 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
StrcQ8VIM6 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
StrcQ8VIM6 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC22.41■■□□□ 1.18
StrcQ8VIM6 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
StrcQ8VIM6 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC22.41■■□□□ 1.18
StrcQ8VIM6 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
StrcQ8VIM6 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
StrcQ8VIM6 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC22.4■■□□□ 1.18
StrcQ8VIM6 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
StrcQ8VIM6 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
StrcQ8VIM6 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
StrcQ8VIM6 Gm45058-201ENSMUST00000205810 766 ntBASIC22.4■■□□□ 1.18
StrcQ8VIM6 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC22.4■■□□□ 1.18
StrcQ8VIM6 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
StrcQ8VIM6 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
StrcQ8VIM6 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
StrcQ8VIM6 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
StrcQ8VIM6 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC22.39■■□□□ 1.17
StrcQ8VIM6 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
StrcQ8VIM6 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
StrcQ8VIM6 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
StrcQ8VIM6 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
StrcQ8VIM6 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
StrcQ8VIM6 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
StrcQ8VIM6 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC22.39■■□□□ 1.17
StrcQ8VIM6 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
StrcQ8VIM6 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
StrcQ8VIM6 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
StrcQ8VIM6 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC22.38■■□□□ 1.17
StrcQ8VIM6 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
StrcQ8VIM6 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC22.37■■□□□ 1.17
StrcQ8VIM6 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
StrcQ8VIM6 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
StrcQ8VIM6 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
StrcQ8VIM6 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC22.37■■□□□ 1.17
StrcQ8VIM6 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
StrcQ8VIM6 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
StrcQ8VIM6 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC22.36■■□□□ 1.17
StrcQ8VIM6 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC22.36■■□□□ 1.17
StrcQ8VIM6 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC22.36■■□□□ 1.17
StrcQ8VIM6 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
StrcQ8VIM6 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
StrcQ8VIM6 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms