Protein–RNA interactions for Protein: Q8VE91

Retreg1d, Reticulophagy regulator 1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg1dQ8VE91 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Retreg1dQ8VE91 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retreg1dQ8VE91 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retreg1dQ8VE91 Gm4968-201ENSMUST00000071458 858 ntBASIC18.28■□□□□ 0.52
Retreg1dQ8VE91 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retreg1dQ8VE91 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retreg1dQ8VE91 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
Retreg1dQ8VE91 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retreg1dQ8VE91 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retreg1dQ8VE91 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retreg1dQ8VE91 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retreg1dQ8VE91 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Retreg1dQ8VE91 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retreg1dQ8VE91 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Retreg1dQ8VE91 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retreg1dQ8VE91 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Retreg1dQ8VE91 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retreg1dQ8VE91 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Retreg1dQ8VE91 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retreg1dQ8VE91 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retreg1dQ8VE91 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.26■□□□□ 0.51
Retreg1dQ8VE91 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retreg1dQ8VE91 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retreg1dQ8VE91 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Retreg1dQ8VE91 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Retreg1dQ8VE91 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Retreg1dQ8VE91 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC18.26■□□□□ 0.51
Retreg1dQ8VE91 Gm6211-202ENSMUST00000167849 925 ntBASIC18.26■□□□□ 0.51
Retreg1dQ8VE91 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Retreg1dQ8VE91 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.26■□□□□ 0.51
Retreg1dQ8VE91 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retreg1dQ8VE91 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retreg1dQ8VE91 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Retreg1dQ8VE91 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Retreg1dQ8VE91 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retreg1dQ8VE91 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retreg1dQ8VE91 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retreg1dQ8VE91 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retreg1dQ8VE91 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.25■□□□□ 0.51
Retreg1dQ8VE91 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retreg1dQ8VE91 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.25■□□□□ 0.51
Retreg1dQ8VE91 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Retreg1dQ8VE91 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retreg1dQ8VE91 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Retreg1dQ8VE91 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Retreg1dQ8VE91 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retreg1dQ8VE91 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retreg1dQ8VE91 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retreg1dQ8VE91 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retreg1dQ8VE91 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retreg1dQ8VE91 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retreg1dQ8VE91 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Retreg1dQ8VE91 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retreg1dQ8VE91 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retreg1dQ8VE91 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retreg1dQ8VE91 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Retreg1dQ8VE91 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.24■□□□□ 0.51
Retreg1dQ8VE91 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retreg1dQ8VE91 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Retreg1dQ8VE91 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retreg1dQ8VE91 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18.24■□□□□ 0.51
Retreg1dQ8VE91 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retreg1dQ8VE91 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retreg1dQ8VE91 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
Retreg1dQ8VE91 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.24■□□□□ 0.51
Retreg1dQ8VE91 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retreg1dQ8VE91 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retreg1dQ8VE91 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
Retreg1dQ8VE91 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retreg1dQ8VE91 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Retreg1dQ8VE91 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retreg1dQ8VE91 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retreg1dQ8VE91 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Retreg1dQ8VE91 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Retreg1dQ8VE91 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Retreg1dQ8VE91 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Retreg1dQ8VE91 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Retreg1dQ8VE91 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.23■□□□□ 0.51
Retreg1dQ8VE91 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retreg1dQ8VE91 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retreg1dQ8VE91 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retreg1dQ8VE91 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.23■□□□□ 0.51
Retreg1dQ8VE91 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retreg1dQ8VE91 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retreg1dQ8VE91 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retreg1dQ8VE91 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.23■□□□□ 0.51
Retreg1dQ8VE91 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retreg1dQ8VE91 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Retreg1dQ8VE91 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Retreg1dQ8VE91 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retreg1dQ8VE91 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.22■□□□□ 0.51
Retreg1dQ8VE91 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retreg1dQ8VE91 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retreg1dQ8VE91 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC18.22■□□□□ 0.51
Retreg1dQ8VE91 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC18.22■□□□□ 0.51
Retreg1dQ8VE91 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Retreg1dQ8VE91 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.22■□□□□ 0.51
Retreg1dQ8VE91 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.22■□□□□ 0.51
Retreg1dQ8VE91 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Retreg1dQ8VE91 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms