Protein–RNA interactions for Protein: Q8CIR4

Trpm6, Transient receptor potential cation channel subfamily M member 6, mousemouse

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm6Q8CIR4 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trpm6Q8CIR4 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trpm6Q8CIR4 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trpm6Q8CIR4 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trpm6Q8CIR4 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC18.66■□□□□ 0.58
Trpm6Q8CIR4 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trpm6Q8CIR4 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trpm6Q8CIR4 Zfp783-201ENSMUST00000095946 670 ntBASIC18.66■□□□□ 0.58
Trpm6Q8CIR4 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.66■□□□□ 0.58
Trpm6Q8CIR4 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
Trpm6Q8CIR4 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trpm6Q8CIR4 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trpm6Q8CIR4 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trpm6Q8CIR4 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC18.66■□□□□ 0.58
Trpm6Q8CIR4 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trpm6Q8CIR4 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Trpm6Q8CIR4 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trpm6Q8CIR4 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trpm6Q8CIR4 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trpm6Q8CIR4 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trpm6Q8CIR4 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trpm6Q8CIR4 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trpm6Q8CIR4 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trpm6Q8CIR4 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trpm6Q8CIR4 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trpm6Q8CIR4 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trpm6Q8CIR4 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trpm6Q8CIR4 Flg-201ENSMUST00000050758 1488 ntBASIC18.65■□□□□ 0.58
Trpm6Q8CIR4 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trpm6Q8CIR4 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.65■□□□□ 0.58
Trpm6Q8CIR4 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Trpm6Q8CIR4 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Trpm6Q8CIR4 Golph3-202ENSMUST00000226517 2359 ntBASIC18.64■□□□□ 0.58
Trpm6Q8CIR4 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
Trpm6Q8CIR4 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Trpm6Q8CIR4 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Trpm6Q8CIR4 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Trpm6Q8CIR4 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC18.64■□□□□ 0.58
Trpm6Q8CIR4 Gm29994-201ENSMUST00000195495 1193 ntBASIC18.64■□□□□ 0.58
Trpm6Q8CIR4 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trpm6Q8CIR4 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trpm6Q8CIR4 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trpm6Q8CIR4 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
Trpm6Q8CIR4 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trpm6Q8CIR4 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trpm6Q8CIR4 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trpm6Q8CIR4 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trpm6Q8CIR4 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC18.64■□□□□ 0.57
Trpm6Q8CIR4 Gm15565-201ENSMUST00000118890 427 ntBASIC18.64■□□□□ 0.57
Trpm6Q8CIR4 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.64■□□□□ 0.57
Trpm6Q8CIR4 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Trpm6Q8CIR4 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Trpm6Q8CIR4 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Trpm6Q8CIR4 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trpm6Q8CIR4 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC18.63■□□□□ 0.57
Trpm6Q8CIR4 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Trpm6Q8CIR4 Mir5122-201ENSMUST00000175004 89 ntBASIC18.63■□□□□ 0.57
Trpm6Q8CIR4 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Trpm6Q8CIR4 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Trpm6Q8CIR4 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trpm6Q8CIR4 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trpm6Q8CIR4 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trpm6Q8CIR4 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Trpm6Q8CIR4 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trpm6Q8CIR4 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
Trpm6Q8CIR4 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trpm6Q8CIR4 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trpm6Q8CIR4 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trpm6Q8CIR4 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trpm6Q8CIR4 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trpm6Q8CIR4 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trpm6Q8CIR4 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trpm6Q8CIR4 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trpm6Q8CIR4 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trpm6Q8CIR4 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trpm6Q8CIR4 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.61■□□□□ 0.57
Trpm6Q8CIR4 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC18.61■□□□□ 0.57
Trpm6Q8CIR4 AL672049.1-201ENSMUST00000197943 91 ntBASIC18.61■□□□□ 0.57
Trpm6Q8CIR4 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trpm6Q8CIR4 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.61■□□□□ 0.57
Trpm6Q8CIR4 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trpm6Q8CIR4 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC18.61■□□□□ 0.57
Trpm6Q8CIR4 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trpm6Q8CIR4 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Trpm6Q8CIR4 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
Trpm6Q8CIR4 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trpm6Q8CIR4 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Trpm6Q8CIR4 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Trpm6Q8CIR4 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trpm6Q8CIR4 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.6■□□□□ 0.57
Trpm6Q8CIR4 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trpm6Q8CIR4 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trpm6Q8CIR4 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trpm6Q8CIR4 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC18.59■□□□□ 0.57
Trpm6Q8CIR4 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trpm6Q8CIR4 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trpm6Q8CIR4 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trpm6Q8CIR4 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trpm6Q8CIR4 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trpm6Q8CIR4 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms