Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Reep4-203ENSMUST00000226563 1444 ntBASIC20.58■□□□□ 0.88
Ccdc38Q8CDN8 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC20.58■□□□□ 0.88
Ccdc38Q8CDN8 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ccdc38Q8CDN8 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc38Q8CDN8 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc38Q8CDN8 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc38Q8CDN8 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc38Q8CDN8 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC20.57■□□□□ 0.88
Ccdc38Q8CDN8 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc38Q8CDN8 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.57■□□□□ 0.88
Ccdc38Q8CDN8 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.57■□□□□ 0.88
Ccdc38Q8CDN8 Gm19094-201ENSMUST00000209791 1246 ntBASIC20.57■□□□□ 0.88
Ccdc38Q8CDN8 Gm9988-201ENSMUST00000069786 435 ntBASIC20.57■□□□□ 0.88
Ccdc38Q8CDN8 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc38Q8CDN8 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc38Q8CDN8 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc38Q8CDN8 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc38Q8CDN8 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc38Q8CDN8 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Ccdc38Q8CDN8 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc38Q8CDN8 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc38Q8CDN8 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc38Q8CDN8 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc38Q8CDN8 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc38Q8CDN8 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
Ccdc38Q8CDN8 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc38Q8CDN8 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc38Q8CDN8 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc38Q8CDN8 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc38Q8CDN8 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc38Q8CDN8 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc38Q8CDN8 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc38Q8CDN8 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc38Q8CDN8 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc38Q8CDN8 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc38Q8CDN8 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.55■□□□□ 0.88
Ccdc38Q8CDN8 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.55■□□□□ 0.88
Ccdc38Q8CDN8 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc38Q8CDN8 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc38Q8CDN8 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc38Q8CDN8 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc38Q8CDN8 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc38Q8CDN8 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC20.54■□□□□ 0.88
Ccdc38Q8CDN8 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC20.54■□□□□ 0.88
Ccdc38Q8CDN8 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc38Q8CDN8 Gm13534-201ENSMUST00000121169 513 ntBASIC20.54■□□□□ 0.88
Ccdc38Q8CDN8 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Ccdc38Q8CDN8 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.54■□□□□ 0.88
Ccdc38Q8CDN8 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Ccdc38Q8CDN8 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc38Q8CDN8 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc38Q8CDN8 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc38Q8CDN8 Gm10167-201ENSMUST00000150411 1479 ntBASIC20.54■□□□□ 0.88
Ccdc38Q8CDN8 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc38Q8CDN8 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc38Q8CDN8 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc38Q8CDN8 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
Ccdc38Q8CDN8 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc38Q8CDN8 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc38Q8CDN8 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Ccdc38Q8CDN8 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc38Q8CDN8 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Ccdc38Q8CDN8 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc38Q8CDN8 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.53■□□□□ 0.88
Ccdc38Q8CDN8 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC20.53■□□□□ 0.88
Ccdc38Q8CDN8 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc38Q8CDN8 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc38Q8CDN8 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc38Q8CDN8 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc38Q8CDN8 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc38Q8CDN8 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc38Q8CDN8 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc38Q8CDN8 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.53■□□□□ 0.88
Ccdc38Q8CDN8 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc38Q8CDN8 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc38Q8CDN8 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc38Q8CDN8 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc38Q8CDN8 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc38Q8CDN8 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC20.52■□□□□ 0.88
Ccdc38Q8CDN8 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc38Q8CDN8 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Ccdc38Q8CDN8 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
Ccdc38Q8CDN8 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.52■□□□□ 0.87
Ccdc38Q8CDN8 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.52■□□□□ 0.87
Ccdc38Q8CDN8 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Ccdc38Q8CDN8 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc38Q8CDN8 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc38Q8CDN8 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc38Q8CDN8 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc38Q8CDN8 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc38Q8CDN8 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc38Q8CDN8 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc38Q8CDN8 Gm42922-201ENSMUST00000195887 2078 ntBASIC20.51■□□□□ 0.87
Ccdc38Q8CDN8 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Ccdc38Q8CDN8 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc38Q8CDN8 Gm35558-201ENSMUST00000222675 2219 ntBASIC20.51■□□□□ 0.87
Ccdc38Q8CDN8 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC20.51■□□□□ 0.87
Ccdc38Q8CDN8 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc38Q8CDN8 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC20.51■□□□□ 0.87
Ccdc38Q8CDN8 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms