Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sh3rf2Q8BZT2 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sh3rf2Q8BZT2 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sh3rf2Q8BZT2 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sh3rf2Q8BZT2 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sh3rf2Q8BZT2 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sh3rf2Q8BZT2 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sh3rf2Q8BZT2 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Sh3rf2Q8BZT2 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sh3rf2Q8BZT2 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sh3rf2Q8BZT2 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sh3rf2Q8BZT2 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sh3rf2Q8BZT2 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sh3rf2Q8BZT2 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sh3rf2Q8BZT2 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sh3rf2Q8BZT2 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Sh3rf2Q8BZT2 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sh3rf2Q8BZT2 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC18.8■□□□□ 0.6
Sh3rf2Q8BZT2 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.8■□□□□ 0.6
Sh3rf2Q8BZT2 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sh3rf2Q8BZT2 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sh3rf2Q8BZT2 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sh3rf2Q8BZT2 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Sh3rf2Q8BZT2 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sh3rf2Q8BZT2 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.79■□□□□ 0.6
Sh3rf2Q8BZT2 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sh3rf2Q8BZT2 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sh3rf2Q8BZT2 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.79■□□□□ 0.6
Sh3rf2Q8BZT2 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sh3rf2Q8BZT2 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Sh3rf2Q8BZT2 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sh3rf2Q8BZT2 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC18.79■□□□□ 0.6
Sh3rf2Q8BZT2 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sh3rf2Q8BZT2 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sh3rf2Q8BZT2 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Sh3rf2Q8BZT2 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sh3rf2Q8BZT2 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sh3rf2Q8BZT2 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Sh3rf2Q8BZT2 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Sh3rf2Q8BZT2 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.78■□□□□ 0.6
Sh3rf2Q8BZT2 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC18.78■□□□□ 0.6
Sh3rf2Q8BZT2 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Sh3rf2Q8BZT2 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sh3rf2Q8BZT2 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sh3rf2Q8BZT2 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Sh3rf2Q8BZT2 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sh3rf2Q8BZT2 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
Sh3rf2Q8BZT2 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sh3rf2Q8BZT2 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sh3rf2Q8BZT2 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Sh3rf2Q8BZT2 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Sh3rf2Q8BZT2 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sh3rf2Q8BZT2 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.77■□□□□ 0.6
Sh3rf2Q8BZT2 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Sh3rf2Q8BZT2 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
Sh3rf2Q8BZT2 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sh3rf2Q8BZT2 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sh3rf2Q8BZT2 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.76■□□□□ 0.59
Sh3rf2Q8BZT2 Gm13181-201ENSMUST00000120117 1069 ntBASIC18.76■□□□□ 0.59
Sh3rf2Q8BZT2 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Sh3rf2Q8BZT2 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sh3rf2Q8BZT2 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sh3rf2Q8BZT2 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Sh3rf2Q8BZT2 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sh3rf2Q8BZT2 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sh3rf2Q8BZT2 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Sh3rf2Q8BZT2 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sh3rf2Q8BZT2 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sh3rf2Q8BZT2 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Sh3rf2Q8BZT2 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sh3rf2Q8BZT2 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sh3rf2Q8BZT2 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sh3rf2Q8BZT2 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.75■□□□□ 0.59
Sh3rf2Q8BZT2 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Sh3rf2Q8BZT2 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sh3rf2Q8BZT2 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sh3rf2Q8BZT2 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Sh3rf2Q8BZT2 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sh3rf2Q8BZT2 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Sh3rf2Q8BZT2 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sh3rf2Q8BZT2 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sh3rf2Q8BZT2 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sh3rf2Q8BZT2 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sh3rf2Q8BZT2 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Sh3rf2Q8BZT2 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sh3rf2Q8BZT2 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Sh3rf2Q8BZT2 Gm18666-201ENSMUST00000190039 958 ntBASIC18.74■□□□□ 0.59
Sh3rf2Q8BZT2 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sh3rf2Q8BZT2 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sh3rf2Q8BZT2 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sh3rf2Q8BZT2 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sh3rf2Q8BZT2 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Sh3rf2Q8BZT2 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Sh3rf2Q8BZT2 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sh3rf2Q8BZT2 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sh3rf2Q8BZT2 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.73■□□□□ 0.59
Sh3rf2Q8BZT2 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sh3rf2Q8BZT2 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sh3rf2Q8BZT2 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sh3rf2Q8BZT2 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms