Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Trerf1Q8BXJ2 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trerf1Q8BXJ2 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
Trerf1Q8BXJ2 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trerf1Q8BXJ2 AC164629.5-201ENSMUST00000220387 632 ntBASIC19.41■□□□□ 0.7
Trerf1Q8BXJ2 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC19.41■□□□□ 0.7
Trerf1Q8BXJ2 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trerf1Q8BXJ2 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trerf1Q8BXJ2 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trerf1Q8BXJ2 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trerf1Q8BXJ2 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trerf1Q8BXJ2 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trerf1Q8BXJ2 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Trerf1Q8BXJ2 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Trerf1Q8BXJ2 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.41■□□□□ 0.7
Trerf1Q8BXJ2 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Trerf1Q8BXJ2 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Trerf1Q8BXJ2 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trerf1Q8BXJ2 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.4■□□□□ 0.7
Trerf1Q8BXJ2 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.4■□□□□ 0.7
Trerf1Q8BXJ2 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Trerf1Q8BXJ2 Gm7860-201ENSMUST00000121190 879 ntBASIC19.4■□□□□ 0.7
Trerf1Q8BXJ2 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Trerf1Q8BXJ2 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Trerf1Q8BXJ2 Gm27405-201ENSMUST00000184201 112 ntBASIC19.4■□□□□ 0.7
Trerf1Q8BXJ2 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.4■□□□□ 0.7
Trerf1Q8BXJ2 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Trerf1Q8BXJ2 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trerf1Q8BXJ2 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Trerf1Q8BXJ2 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Trerf1Q8BXJ2 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trerf1Q8BXJ2 Gm19439-201ENSMUST00000198195 2273 ntBASIC19.4■□□□□ 0.7
Trerf1Q8BXJ2 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Trerf1Q8BXJ2 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trerf1Q8BXJ2 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Trerf1Q8BXJ2 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Trerf1Q8BXJ2 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
Trerf1Q8BXJ2 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
Trerf1Q8BXJ2 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trerf1Q8BXJ2 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.39■□□□□ 0.69
Trerf1Q8BXJ2 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.39■□□□□ 0.69
Trerf1Q8BXJ2 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Trerf1Q8BXJ2 Gm7291-201ENSMUST00000199147 382 ntBASIC19.39■□□□□ 0.69
Trerf1Q8BXJ2 AV356131-201ENSMUST00000206201 750 ntBASIC19.39■□□□□ 0.69
Trerf1Q8BXJ2 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trerf1Q8BXJ2 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Trerf1Q8BXJ2 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trerf1Q8BXJ2 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trerf1Q8BXJ2 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trerf1Q8BXJ2 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trerf1Q8BXJ2 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trerf1Q8BXJ2 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trerf1Q8BXJ2 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Trerf1Q8BXJ2 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trerf1Q8BXJ2 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trerf1Q8BXJ2 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.38■□□□□ 0.69
Trerf1Q8BXJ2 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.38■□□□□ 0.69
Trerf1Q8BXJ2 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Trerf1Q8BXJ2 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trerf1Q8BXJ2 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trerf1Q8BXJ2 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trerf1Q8BXJ2 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trerf1Q8BXJ2 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trerf1Q8BXJ2 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trerf1Q8BXJ2 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trerf1Q8BXJ2 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trerf1Q8BXJ2 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC19.37■□□□□ 0.69
Trerf1Q8BXJ2 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trerf1Q8BXJ2 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trerf1Q8BXJ2 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trerf1Q8BXJ2 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trerf1Q8BXJ2 Gm13234-201ENSMUST00000120010 747 ntBASIC19.37■□□□□ 0.69
Trerf1Q8BXJ2 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.37■□□□□ 0.69
Trerf1Q8BXJ2 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trerf1Q8BXJ2 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trerf1Q8BXJ2 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trerf1Q8BXJ2 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Trerf1Q8BXJ2 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trerf1Q8BXJ2 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC19.36■□□□□ 0.69
Trerf1Q8BXJ2 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Trerf1Q8BXJ2 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Trerf1Q8BXJ2 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.36■□□□□ 0.69
Trerf1Q8BXJ2 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC19.36■□□□□ 0.69
Trerf1Q8BXJ2 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Trerf1Q8BXJ2 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trerf1Q8BXJ2 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trerf1Q8BXJ2 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trerf1Q8BXJ2 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trerf1Q8BXJ2 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Trerf1Q8BXJ2 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
Trerf1Q8BXJ2 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
Trerf1Q8BXJ2 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trerf1Q8BXJ2 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trerf1Q8BXJ2 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Trerf1Q8BXJ2 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC19.35■□□□□ 0.69
Trerf1Q8BXJ2 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trerf1Q8BXJ2 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Trerf1Q8BXJ2 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trerf1Q8BXJ2 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trerf1Q8BXJ2 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms