Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cdk5rap1Q8BTW8 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.58■□□□□ 0.4
Cdk5rap1Q8BTW8 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.58■□□□□ 0.4
Cdk5rap1Q8BTW8 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cdk5rap1Q8BTW8 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Cdk5rap1Q8BTW8 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdk5rap1Q8BTW8 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Cdk5rap1Q8BTW8 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cdk5rap1Q8BTW8 Gm12896-201ENSMUST00000118430 226 ntBASIC17.57■□□□□ 0.4
Cdk5rap1Q8BTW8 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Cdk5rap1Q8BTW8 Gm22240-201ENSMUST00000175225 82 ntBASIC17.57■□□□□ 0.4
Cdk5rap1Q8BTW8 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.57■□□□□ 0.4
Cdk5rap1Q8BTW8 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Cdk5rap1Q8BTW8 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cdk5rap1Q8BTW8 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Cdk5rap1Q8BTW8 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdk5rap1Q8BTW8 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdk5rap1Q8BTW8 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdk5rap1Q8BTW8 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdk5rap1Q8BTW8 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdk5rap1Q8BTW8 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdk5rap1Q8BTW8 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdk5rap1Q8BTW8 Gm13168-201ENSMUST00000121771 632 ntBASIC17.56■□□□□ 0.4
Cdk5rap1Q8BTW8 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cdk5rap1Q8BTW8 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cdk5rap1Q8BTW8 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdk5rap1Q8BTW8 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.56■□□□□ 0.4
Cdk5rap1Q8BTW8 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Cdk5rap1Q8BTW8 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdk5rap1Q8BTW8 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cdk5rap1Q8BTW8 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cdk5rap1Q8BTW8 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cdk5rap1Q8BTW8 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cdk5rap1Q8BTW8 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cdk5rap1Q8BTW8 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Cdk5rap1Q8BTW8 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Cdk5rap1Q8BTW8 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.55■□□□□ 0.4
Cdk5rap1Q8BTW8 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdk5rap1Q8BTW8 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdk5rap1Q8BTW8 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Cdk5rap1Q8BTW8 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdk5rap1Q8BTW8 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cdk5rap1Q8BTW8 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cdk5rap1Q8BTW8 Gm27275-201ENSMUST00000184318 272 ntBASIC17.54■□□□□ 0.4
Cdk5rap1Q8BTW8 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdk5rap1Q8BTW8 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdk5rap1Q8BTW8 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cdk5rap1Q8BTW8 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdk5rap1Q8BTW8 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cdk5rap1Q8BTW8 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdk5rap1Q8BTW8 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
Cdk5rap1Q8BTW8 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdk5rap1Q8BTW8 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdk5rap1Q8BTW8 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.53■□□□□ 0.4
Cdk5rap1Q8BTW8 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cdk5rap1Q8BTW8 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Cdk5rap1Q8BTW8 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cdk5rap1Q8BTW8 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.52■□□□□ 0.4
Cdk5rap1Q8BTW8 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cdk5rap1Q8BTW8 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cdk5rap1Q8BTW8 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cdk5rap1Q8BTW8 Dio3-201ENSMUST00000097228 1449 ntBASIC17.52■□□□□ 0.4
Cdk5rap1Q8BTW8 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cdk5rap1Q8BTW8 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cdk5rap1Q8BTW8 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdk5rap1Q8BTW8 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdk5rap1Q8BTW8 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdk5rap1Q8BTW8 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdk5rap1Q8BTW8 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdk5rap1Q8BTW8 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cdk5rap1Q8BTW8 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cdk5rap1Q8BTW8 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.51■□□□□ 0.39
Cdk5rap1Q8BTW8 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.51■□□□□ 0.39
Cdk5rap1Q8BTW8 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdk5rap1Q8BTW8 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdk5rap1Q8BTW8 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.51■□□□□ 0.39
Cdk5rap1Q8BTW8 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cdk5rap1Q8BTW8 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Cdk5rap1Q8BTW8 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Cdk5rap1Q8BTW8 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Cdk5rap1Q8BTW8 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.5■□□□□ 0.39
Cdk5rap1Q8BTW8 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdk5rap1Q8BTW8 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.5■□□□□ 0.39
Cdk5rap1Q8BTW8 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdk5rap1Q8BTW8 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdk5rap1Q8BTW8 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdk5rap1Q8BTW8 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdk5rap1Q8BTW8 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.5■□□□□ 0.39
Cdk5rap1Q8BTW8 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdk5rap1Q8BTW8 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.5■□□□□ 0.39
Cdk5rap1Q8BTW8 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdk5rap1Q8BTW8 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Cdk5rap1Q8BTW8 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cdk5rap1Q8BTW8 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdk5rap1Q8BTW8 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.5■□□□□ 0.39
Cdk5rap1Q8BTW8 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.5■□□□□ 0.39
Cdk5rap1Q8BTW8 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdk5rap1Q8BTW8 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdk5rap1Q8BTW8 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdk5rap1Q8BTW8 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms