Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Scfd1Q8BRF7 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Scfd1Q8BRF7 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Scfd1Q8BRF7 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
Scfd1Q8BRF7 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Scfd1Q8BRF7 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Scfd1Q8BRF7 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Scfd1Q8BRF7 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Scfd1Q8BRF7 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Scfd1Q8BRF7 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Scfd1Q8BRF7 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Scfd1Q8BRF7 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC21.24■□□□□ 0.99
Scfd1Q8BRF7 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Scfd1Q8BRF7 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC21.24■□□□□ 0.99
Scfd1Q8BRF7 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Scfd1Q8BRF7 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Scfd1Q8BRF7 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Scfd1Q8BRF7 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC21.24■□□□□ 0.99
Scfd1Q8BRF7 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Scfd1Q8BRF7 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Scfd1Q8BRF7 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC21.23■□□□□ 0.99
Scfd1Q8BRF7 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC21.23■□□□□ 0.99
Scfd1Q8BRF7 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Scfd1Q8BRF7 Nrn1-203ENSMUST00000223611 1443 ntBASIC21.23■□□□□ 0.99
Scfd1Q8BRF7 Gm13181-201ENSMUST00000120117 1069 ntBASIC21.23■□□□□ 0.99
Scfd1Q8BRF7 Gm13158-201ENSMUST00000122007 736 ntBASIC21.23■□□□□ 0.99
Scfd1Q8BRF7 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Scfd1Q8BRF7 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Scfd1Q8BRF7 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
Scfd1Q8BRF7 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Scfd1Q8BRF7 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Scfd1Q8BRF7 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Scfd1Q8BRF7 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Scfd1Q8BRF7 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Scfd1Q8BRF7 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Scfd1Q8BRF7 Gm11927-201ENSMUST00000118472 759 ntBASIC21.22■□□□□ 0.99
Scfd1Q8BRF7 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC21.22■□□□□ 0.99
Scfd1Q8BRF7 AC107452.1-201ENSMUST00000227963 481 ntBASIC21.22■□□□□ 0.99
Scfd1Q8BRF7 AC163280.1-201ENSMUST00000228194 1100 ntBASIC21.22■□□□□ 0.99
Scfd1Q8BRF7 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Scfd1Q8BRF7 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Scfd1Q8BRF7 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Scfd1Q8BRF7 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Scfd1Q8BRF7 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Scfd1Q8BRF7 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Scfd1Q8BRF7 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Scfd1Q8BRF7 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Scfd1Q8BRF7 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Scfd1Q8BRF7 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Scfd1Q8BRF7 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Scfd1Q8BRF7 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Scfd1Q8BRF7 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Scfd1Q8BRF7 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Scfd1Q8BRF7 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC21.21■□□□□ 0.99
Scfd1Q8BRF7 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Scfd1Q8BRF7 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Scfd1Q8BRF7 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Scfd1Q8BRF7 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Scfd1Q8BRF7 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Scfd1Q8BRF7 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC21.21■□□□□ 0.99
Scfd1Q8BRF7 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Scfd1Q8BRF7 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Scfd1Q8BRF7 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Scfd1Q8BRF7 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC21.2■□□□□ 0.98
Scfd1Q8BRF7 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Scfd1Q8BRF7 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC21.2■□□□□ 0.98
Scfd1Q8BRF7 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Scfd1Q8BRF7 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Scfd1Q8BRF7 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.98
Scfd1Q8BRF7 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Scfd1Q8BRF7 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Scfd1Q8BRF7 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Scfd1Q8BRF7 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Scfd1Q8BRF7 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Scfd1Q8BRF7 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Scfd1Q8BRF7 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Scfd1Q8BRF7 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Scfd1Q8BRF7 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Scfd1Q8BRF7 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Scfd1Q8BRF7 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Scfd1Q8BRF7 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Scfd1Q8BRF7 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Scfd1Q8BRF7 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Scfd1Q8BRF7 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC21.18■□□□□ 0.98
Scfd1Q8BRF7 H2-K2-201ENSMUST00000174250 1049 ntBASIC21.18■□□□□ 0.98
Scfd1Q8BRF7 Gm10698-201ENSMUST00000182663 604 ntBASIC21.18■□□□□ 0.98
Scfd1Q8BRF7 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC21.18■□□□□ 0.98
Scfd1Q8BRF7 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Scfd1Q8BRF7 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Scfd1Q8BRF7 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Scfd1Q8BRF7 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Scfd1Q8BRF7 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Scfd1Q8BRF7 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Scfd1Q8BRF7 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
Scfd1Q8BRF7 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
Scfd1Q8BRF7 Gm37805-201ENSMUST00000192612 1094 ntBASIC21.17■□□□□ 0.98
Scfd1Q8BRF7 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC21.17■□□□□ 0.98
Scfd1Q8BRF7 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Scfd1Q8BRF7 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Scfd1Q8BRF7 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms