Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.17■□□□□ 0.5
Ccdc116Q80X53 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc116Q80X53 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc116Q80X53 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc116Q80X53 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Ccdc116Q80X53 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc116Q80X53 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc116Q80X53 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc116Q80X53 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc116Q80X53 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc116Q80X53 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc116Q80X53 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC18.16■□□□□ 0.5
Ccdc116Q80X53 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc116Q80X53 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc116Q80X53 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc116Q80X53 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc116Q80X53 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Ccdc116Q80X53 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc116Q80X53 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.16■□□□□ 0.5
Ccdc116Q80X53 Rarb-207ENSMUST00000225921 2756 ntBASIC18.16■□□□□ 0.5
Ccdc116Q80X53 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc116Q80X53 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc116Q80X53 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.16■□□□□ 0.5
Ccdc116Q80X53 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.16■□□□□ 0.5
Ccdc116Q80X53 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc116Q80X53 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc116Q80X53 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc116Q80X53 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Ccdc116Q80X53 Gm13234-201ENSMUST00000120010 747 ntBASIC18.15■□□□□ 0.5
Ccdc116Q80X53 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc116Q80X53 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc116Q80X53 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.15■□□□□ 0.5
Ccdc116Q80X53 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
Ccdc116Q80X53 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc116Q80X53 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.15■□□□□ 0.5
Ccdc116Q80X53 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc116Q80X53 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Ccdc116Q80X53 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Ccdc116Q80X53 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.14■□□□□ 0.5
Ccdc116Q80X53 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Ccdc116Q80X53 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ccdc116Q80X53 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ccdc116Q80X53 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ccdc116Q80X53 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.14■□□□□ 0.49
Ccdc116Q80X53 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ccdc116Q80X53 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ccdc116Q80X53 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ccdc116Q80X53 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.14■□□□□ 0.49
Ccdc116Q80X53 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ccdc116Q80X53 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ccdc116Q80X53 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ccdc116Q80X53 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ccdc116Q80X53 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ccdc116Q80X53 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.13■□□□□ 0.49
Ccdc116Q80X53 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ccdc116Q80X53 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ccdc116Q80X53 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ccdc116Q80X53 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.13■□□□□ 0.49
Ccdc116Q80X53 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ccdc116Q80X53 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ccdc116Q80X53 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ccdc116Q80X53 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.13■□□□□ 0.49
Ccdc116Q80X53 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Ccdc116Q80X53 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ccdc116Q80X53 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Ccdc116Q80X53 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ccdc116Q80X53 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ccdc116Q80X53 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ccdc116Q80X53 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ccdc116Q80X53 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ccdc116Q80X53 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Ccdc116Q80X53 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ccdc116Q80X53 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ccdc116Q80X53 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.11■□□□□ 0.49
Ccdc116Q80X53 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.11■□□□□ 0.49
Ccdc116Q80X53 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.11■□□□□ 0.49
Ccdc116Q80X53 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.11■□□□□ 0.49
Ccdc116Q80X53 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
Ccdc116Q80X53 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ccdc116Q80X53 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ccdc116Q80X53 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ccdc116Q80X53 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ccdc116Q80X53 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ccdc116Q80X53 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ccdc116Q80X53 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ccdc116Q80X53 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ccdc116Q80X53 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ccdc116Q80X53 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ccdc116Q80X53 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.1■□□□□ 0.49
Ccdc116Q80X53 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ccdc116Q80X53 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ccdc116Q80X53 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ccdc116Q80X53 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ccdc116Q80X53 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ccdc116Q80X53 Gm15039-201ENSMUST00000118914 875 ntBASIC18.1■□□□□ 0.49
Ccdc116Q80X53 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ccdc116Q80X53 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ccdc116Q80X53 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ccdc116Q80X53 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ccdc116Q80X53 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms