Protein–RNA interactions for Protein: Q80WR1

Tspan18, Tetraspanin-18, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tspan18Q80WR1 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC19.77■□□□□ 0.76
Tspan18Q80WR1 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Tspan18Q80WR1 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Tspan18Q80WR1 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Tspan18Q80WR1 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Tspan18Q80WR1 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Tspan18Q80WR1 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tspan18Q80WR1 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Tspan18Q80WR1 Gm12896-201ENSMUST00000118430 226 ntBASIC19.76■□□□□ 0.75
Tspan18Q80WR1 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19.76■□□□□ 0.75
Tspan18Q80WR1 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC19.76■□□□□ 0.75
Tspan18Q80WR1 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tspan18Q80WR1 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Tspan18Q80WR1 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.76■□□□□ 0.75
Tspan18Q80WR1 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tspan18Q80WR1 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Tspan18Q80WR1 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Tspan18Q80WR1 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Tspan18Q80WR1 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tspan18Q80WR1 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.75■□□□□ 0.75
Tspan18Q80WR1 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tspan18Q80WR1 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Tspan18Q80WR1 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tspan18Q80WR1 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
Tspan18Q80WR1 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Tspan18Q80WR1 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tspan18Q80WR1 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tspan18Q80WR1 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.74■□□□□ 0.75
Tspan18Q80WR1 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tspan18Q80WR1 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tspan18Q80WR1 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tspan18Q80WR1 Flg-201ENSMUST00000050758 1488 ntBASIC19.74■□□□□ 0.75
Tspan18Q80WR1 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tspan18Q80WR1 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tspan18Q80WR1 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Tspan18Q80WR1 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC19.74■□□□□ 0.75
Tspan18Q80WR1 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC19.74■□□□□ 0.75
Tspan18Q80WR1 AC135637.1-201ENSMUST00000227750 365 ntBASIC19.74■□□□□ 0.75
Tspan18Q80WR1 AC112142.1-201ENSMUST00000228796 918 ntBASIC19.74■□□□□ 0.75
Tspan18Q80WR1 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tspan18Q80WR1 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Tspan18Q80WR1 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Tspan18Q80WR1 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Tspan18Q80WR1 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Tspan18Q80WR1 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tspan18Q80WR1 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19.73■□□□□ 0.75
Tspan18Q80WR1 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tspan18Q80WR1 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Tspan18Q80WR1 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tspan18Q80WR1 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Tspan18Q80WR1 Gm8520-201ENSMUST00000186517 868 ntBASIC19.73■□□□□ 0.75
Tspan18Q80WR1 Trmt13-210ENSMUST00000198454 880 ntBASIC19.73■□□□□ 0.75
Tspan18Q80WR1 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC19.73■□□□□ 0.75
Tspan18Q80WR1 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tspan18Q80WR1 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tspan18Q80WR1 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tspan18Q80WR1 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Tspan18Q80WR1 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tspan18Q80WR1 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Tspan18Q80WR1 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tspan18Q80WR1 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Tspan18Q80WR1 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Tspan18Q80WR1 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Tspan18Q80WR1 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tspan18Q80WR1 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tspan18Q80WR1 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tspan18Q80WR1 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Tspan18Q80WR1 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.71■□□□□ 0.75
Tspan18Q80WR1 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tspan18Q80WR1 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tspan18Q80WR1 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Tspan18Q80WR1 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tspan18Q80WR1 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Tspan18Q80WR1 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tspan18Q80WR1 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tspan18Q80WR1 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tspan18Q80WR1 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tspan18Q80WR1 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tspan18Q80WR1 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Tspan18Q80WR1 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC19.7■□□□□ 0.74
Tspan18Q80WR1 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tspan18Q80WR1 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC19.7■□□□□ 0.74
Tspan18Q80WR1 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tspan18Q80WR1 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tspan18Q80WR1 Gm15847-201ENSMUST00000121417 1065 ntBASIC19.7■□□□□ 0.74
Tspan18Q80WR1 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Tspan18Q80WR1 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC19.7■□□□□ 0.74
Tspan18Q80WR1 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Tspan18Q80WR1 Gm44878-201ENSMUST00000205812 1295 ntBASIC19.7■□□□□ 0.74
Tspan18Q80WR1 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tspan18Q80WR1 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
Tspan18Q80WR1 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tspan18Q80WR1 Gm21596-201ENSMUST00000178049 1316 ntBASIC19.7■□□□□ 0.74
Tspan18Q80WR1 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tspan18Q80WR1 Gm9194-201ENSMUST00000220749 1447 ntBASIC19.69■□□□□ 0.74
Tspan18Q80WR1 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tspan18Q80WR1 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tspan18Q80WR1 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.69■□□□□ 0.74
Tspan18Q80WR1 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tspan18Q80WR1 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms