Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC28.99■■■□□ 2.23
Rpap1Q80TE0 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
Rpap1Q80TE0 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC28.99■■■□□ 2.23
Rpap1Q80TE0 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC28.99■■■□□ 2.23
Rpap1Q80TE0 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
Rpap1Q80TE0 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC28.99■■■□□ 2.23
Rpap1Q80TE0 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
Rpap1Q80TE0 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
Rpap1Q80TE0 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
Rpap1Q80TE0 Gm42545-201ENSMUST00000202755 922 ntBASIC28.98■■■□□ 2.23
Rpap1Q80TE0 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC28.98■■■□□ 2.23
Rpap1Q80TE0 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
Rpap1Q80TE0 Gm45560-201ENSMUST00000211492 1472 ntBASIC28.98■■■□□ 2.23
Rpap1Q80TE0 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
Rpap1Q80TE0 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
Rpap1Q80TE0 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
Rpap1Q80TE0 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
Rpap1Q80TE0 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
Rpap1Q80TE0 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
Rpap1Q80TE0 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC28.97■■■□□ 2.23
Rpap1Q80TE0 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
Rpap1Q80TE0 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC28.97■■■□□ 2.23
Rpap1Q80TE0 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC28.97■■■□□ 2.23
Rpap1Q80TE0 Gm38285-201ENSMUST00000192928 922 ntBASIC28.97■■■□□ 2.23
Rpap1Q80TE0 Gm3375-201ENSMUST00000203929 796 ntBASIC28.97■■■□□ 2.23
Rpap1Q80TE0 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
Rpap1Q80TE0 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC28.96■■■□□ 2.23
Rpap1Q80TE0 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
Rpap1Q80TE0 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
Rpap1Q80TE0 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC28.96■■■□□ 2.23
Rpap1Q80TE0 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC28.96■■■□□ 2.23
Rpap1Q80TE0 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
Rpap1Q80TE0 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
Rpap1Q80TE0 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC28.95■■■□□ 2.23
Rpap1Q80TE0 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC28.95■■■□□ 2.23
Rpap1Q80TE0 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC28.95■■■□□ 2.23
Rpap1Q80TE0 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.23
Rpap1Q80TE0 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC28.95■■■□□ 2.23
Rpap1Q80TE0 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC28.94■■■□□ 2.22
Rpap1Q80TE0 Gm15375-201ENSMUST00000119510 849 ntBASIC28.94■■■□□ 2.22
Rpap1Q80TE0 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC28.94■■■□□ 2.22
Rpap1Q80TE0 Otx2os1-204ENSMUST00000227221 751 ntBASIC28.94■■■□□ 2.22
Rpap1Q80TE0 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC28.94■■■□□ 2.22
Rpap1Q80TE0 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Rpap1Q80TE0 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
Rpap1Q80TE0 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Rpap1Q80TE0 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Rpap1Q80TE0 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC28.94■■■□□ 2.22
Rpap1Q80TE0 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Rpap1Q80TE0 Gm6659-201ENSMUST00000174752 547 ntBASIC28.94■■■□□ 2.22
Rpap1Q80TE0 Gm37292-201ENSMUST00000192062 758 ntBASIC28.94■■■□□ 2.22
Rpap1Q80TE0 AC156016.1-201ENSMUST00000227190 1035 ntBASIC28.94■■■□□ 2.22
Rpap1Q80TE0 Odf3b-204ENSMUST00000227834 930 ntBASIC28.94■■■□□ 2.22
Rpap1Q80TE0 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Rpap1Q80TE0 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
Rpap1Q80TE0 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC28.93■■■□□ 2.22
Rpap1Q80TE0 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC28.93■■■□□ 2.22
Rpap1Q80TE0 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
Rpap1Q80TE0 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
Rpap1Q80TE0 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC28.92■■■□□ 2.22
Rpap1Q80TE0 AC124581.1-201ENSMUST00000225416 1399 ntBASIC28.91■■■□□ 2.22
Rpap1Q80TE0 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
Rpap1Q80TE0 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC28.91■■■□□ 2.22
Rpap1Q80TE0 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
Rpap1Q80TE0 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC28.9■■■□□ 2.22
Rpap1Q80TE0 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC28.9■■■□□ 2.22
Rpap1Q80TE0 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Rpap1Q80TE0 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Rpap1Q80TE0 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC28.9■■■□□ 2.22
Rpap1Q80TE0 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Rpap1Q80TE0 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC28.9■■■□□ 2.22
Rpap1Q80TE0 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
Rpap1Q80TE0 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
Rpap1Q80TE0 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
Rpap1Q80TE0 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
Rpap1Q80TE0 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC28.89■■■□□ 2.22
Rpap1Q80TE0 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
Rpap1Q80TE0 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
Rpap1Q80TE0 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
Rpap1Q80TE0 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC28.89■■■□□ 2.21
Rpap1Q80TE0 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
Rpap1Q80TE0 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC28.88■■■□□ 2.21
Rpap1Q80TE0 Gm7367-201ENSMUST00000057611 492 ntBASIC28.88■■■□□ 2.21
Rpap1Q80TE0 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC28.88■■■□□ 2.21
Rpap1Q80TE0 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Rpap1Q80TE0 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC28.88■■■□□ 2.21
Rpap1Q80TE0 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
Rpap1Q80TE0 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC28.88■■■□□ 2.21
Rpap1Q80TE0 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
Rpap1Q80TE0 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC28.87■■■□□ 2.21
Rpap1Q80TE0 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC28.87■■■□□ 2.21
Rpap1Q80TE0 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
Rpap1Q80TE0 Gm7712-202ENSMUST00000222331 1510 ntBASIC28.87■■■□□ 2.21
Rpap1Q80TE0 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
Rpap1Q80TE0 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC28.87■■■□□ 2.21
Rpap1Q80TE0 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
Rpap1Q80TE0 Timm23-208ENSMUST00000226683 750 ntBASIC28.86■■■□□ 2.21
Rpap1Q80TE0 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC28.86■■■□□ 2.21
Rpap1Q80TE0 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
Rpap1Q80TE0 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC28.86■■■□□ 2.21
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms