Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfx4Q7TNK1 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Rfx4Q7TNK1 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfx4Q7TNK1 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfx4Q7TNK1 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Rfx4Q7TNK1 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Rfx4Q7TNK1 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rfx4Q7TNK1 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rfx4Q7TNK1 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rfx4Q7TNK1 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rfx4Q7TNK1 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rfx4Q7TNK1 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC17.78■□□□□ 0.44
Rfx4Q7TNK1 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rfx4Q7TNK1 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.78■□□□□ 0.44
Rfx4Q7TNK1 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rfx4Q7TNK1 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
Rfx4Q7TNK1 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rfx4Q7TNK1 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.78■□□□□ 0.44
Rfx4Q7TNK1 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rfx4Q7TNK1 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.77■□□□□ 0.44
Rfx4Q7TNK1 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rfx4Q7TNK1 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rfx4Q7TNK1 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rfx4Q7TNK1 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rfx4Q7TNK1 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rfx4Q7TNK1 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rfx4Q7TNK1 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Rfx4Q7TNK1 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rfx4Q7TNK1 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Rfx4Q7TNK1 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rfx4Q7TNK1 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC17.77■□□□□ 0.44
Rfx4Q7TNK1 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rfx4Q7TNK1 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rfx4Q7TNK1 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rfx4Q7TNK1 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rfx4Q7TNK1 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Rfx4Q7TNK1 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.43
Rfx4Q7TNK1 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.77■□□□□ 0.43
Rfx4Q7TNK1 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rfx4Q7TNK1 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rfx4Q7TNK1 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rfx4Q7TNK1 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rfx4Q7TNK1 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rfx4Q7TNK1 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rfx4Q7TNK1 Gm15546-201ENSMUST00000122095 826 ntBASIC17.76■□□□□ 0.43
Rfx4Q7TNK1 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC17.76■□□□□ 0.43
Rfx4Q7TNK1 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rfx4Q7TNK1 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rfx4Q7TNK1 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rfx4Q7TNK1 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rfx4Q7TNK1 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.76■□□□□ 0.43
Rfx4Q7TNK1 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rfx4Q7TNK1 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.76■□□□□ 0.43
Rfx4Q7TNK1 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rfx4Q7TNK1 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rfx4Q7TNK1 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rfx4Q7TNK1 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Rfx4Q7TNK1 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Rfx4Q7TNK1 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rfx4Q7TNK1 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rfx4Q7TNK1 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rfx4Q7TNK1 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rfx4Q7TNK1 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Rfx4Q7TNK1 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Rfx4Q7TNK1 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rfx4Q7TNK1 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Rfx4Q7TNK1 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC17.75■□□□□ 0.43
Rfx4Q7TNK1 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rfx4Q7TNK1 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rfx4Q7TNK1 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rfx4Q7TNK1 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rfx4Q7TNK1 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rfx4Q7TNK1 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Rfx4Q7TNK1 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rfx4Q7TNK1 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rfx4Q7TNK1 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rfx4Q7TNK1 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rfx4Q7TNK1 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rfx4Q7TNK1 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rfx4Q7TNK1 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rfx4Q7TNK1 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rfx4Q7TNK1 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
Rfx4Q7TNK1 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rfx4Q7TNK1 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC17.74■□□□□ 0.43
Rfx4Q7TNK1 Gm22238-201ENSMUST00000175222 88 ntBASIC17.74■□□□□ 0.43
Rfx4Q7TNK1 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rfx4Q7TNK1 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Rfx4Q7TNK1 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rfx4Q7TNK1 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rfx4Q7TNK1 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.74■□□□□ 0.43
Rfx4Q7TNK1 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rfx4Q7TNK1 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rfx4Q7TNK1 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Rfx4Q7TNK1 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rfx4Q7TNK1 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rfx4Q7TNK1 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rfx4Q7TNK1 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rfx4Q7TNK1 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rfx4Q7TNK1 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rfx4Q7TNK1 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms