Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Scn10aQ6QIY3 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Scn10aQ6QIY3 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC21.28■■□□□ 1
Scn10aQ6QIY3 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Scn10aQ6QIY3 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC21.28■■□□□ 1
Scn10aQ6QIY3 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC21.28■■□□□ 1
Scn10aQ6QIY3 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Scn10aQ6QIY3 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Scn10aQ6QIY3 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Scn10aQ6QIY3 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC21.27■■□□□ 1
Scn10aQ6QIY3 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC21.27■■□□□ 1
Scn10aQ6QIY3 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Scn10aQ6QIY3 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Scn10aQ6QIY3 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Scn10aQ6QIY3 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Scn10aQ6QIY3 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC21.27■□□□□ 0.99
Scn10aQ6QIY3 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Scn10aQ6QIY3 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC21.27■□□□□ 0.99
Scn10aQ6QIY3 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Scn10aQ6QIY3 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC21.26■□□□□ 0.99
Scn10aQ6QIY3 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Scn10aQ6QIY3 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Scn10aQ6QIY3 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Scn10aQ6QIY3 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Scn10aQ6QIY3 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Scn10aQ6QIY3 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Scn10aQ6QIY3 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Scn10aQ6QIY3 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Scn10aQ6QIY3 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Scn10aQ6QIY3 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Scn10aQ6QIY3 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Scn10aQ6QIY3 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Scn10aQ6QIY3 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Scn10aQ6QIY3 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Scn10aQ6QIY3 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Scn10aQ6QIY3 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Scn10aQ6QIY3 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Scn10aQ6QIY3 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Scn10aQ6QIY3 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Scn10aQ6QIY3 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Scn10aQ6QIY3 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Scn10aQ6QIY3 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Scn10aQ6QIY3 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Scn10aQ6QIY3 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Scn10aQ6QIY3 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Scn10aQ6QIY3 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Scn10aQ6QIY3 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Scn10aQ6QIY3 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC21.23■□□□□ 0.99
Scn10aQ6QIY3 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Scn10aQ6QIY3 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Scn10aQ6QIY3 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Scn10aQ6QIY3 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Scn10aQ6QIY3 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Scn10aQ6QIY3 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Scn10aQ6QIY3 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Scn10aQ6QIY3 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC21.22■□□□□ 0.99
Scn10aQ6QIY3 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Scn10aQ6QIY3 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Scn10aQ6QIY3 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC21.22■□□□□ 0.99
Scn10aQ6QIY3 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.21■□□□□ 0.99
Scn10aQ6QIY3 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
Scn10aQ6QIY3 Gm6728-201ENSMUST00000178117 1065 ntBASIC21.21■□□□□ 0.99
Scn10aQ6QIY3 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Scn10aQ6QIY3 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC21.21■□□□□ 0.99
Scn10aQ6QIY3 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Scn10aQ6QIY3 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Scn10aQ6QIY3 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Scn10aQ6QIY3 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Scn10aQ6QIY3 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Scn10aQ6QIY3 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Scn10aQ6QIY3 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC21.21■□□□□ 0.99
Scn10aQ6QIY3 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Scn10aQ6QIY3 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Scn10aQ6QIY3 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.2■□□□□ 0.98
Scn10aQ6QIY3 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC21.2■□□□□ 0.98
Scn10aQ6QIY3 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Scn10aQ6QIY3 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC21.2■□□□□ 0.98
Scn10aQ6QIY3 Gm23634-201ENSMUST00000175071 91 ntBASIC21.2■□□□□ 0.98
Scn10aQ6QIY3 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC21.2■□□□□ 0.98
Scn10aQ6QIY3 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.98
Scn10aQ6QIY3 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Scn10aQ6QIY3 Gm10517-202ENSMUST00000192970 758 ntBASIC21.19■□□□□ 0.98
Scn10aQ6QIY3 Gm37805-201ENSMUST00000192612 1094 ntBASIC21.19■□□□□ 0.98
Scn10aQ6QIY3 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Scn10aQ6QIY3 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Scn10aQ6QIY3 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC21.18■□□□□ 0.98
Scn10aQ6QIY3 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Scn10aQ6QIY3 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Scn10aQ6QIY3 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC21.18■□□□□ 0.98
Scn10aQ6QIY3 Gm6345-202ENSMUST00000180900 204 ntBASIC21.18■□□□□ 0.98
Scn10aQ6QIY3 Gm18959-201ENSMUST00000208954 655 ntBASIC21.18■□□□□ 0.98
Scn10aQ6QIY3 AC124603.1-201ENSMUST00000223843 308 ntBASIC21.18■□□□□ 0.98
Scn10aQ6QIY3 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
Scn10aQ6QIY3 Mir2861-201ENSMUST00000175539 82 ntBASIC21.17■□□□□ 0.98
Scn10aQ6QIY3 Gm27741-201ENSMUST00000185060 237 ntBASIC21.17■□□□□ 0.98
Scn10aQ6QIY3 Gm44544-201ENSMUST00000207052 1844 ntBASIC21.17■□□□□ 0.98
Scn10aQ6QIY3 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Scn10aQ6QIY3 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Scn10aQ6QIY3 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Scn10aQ6QIY3 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms