Protein–RNA interactions for Protein: Q6PFY8

Trim45, Tripartite motif-containing protein 45, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim45Q6PFY8 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trim45Q6PFY8 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.52■□□□□ 0.4
Trim45Q6PFY8 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim45Q6PFY8 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim45Q6PFY8 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim45Q6PFY8 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim45Q6PFY8 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trim45Q6PFY8 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Trim45Q6PFY8 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trim45Q6PFY8 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC17.52■□□□□ 0.39
Trim45Q6PFY8 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trim45Q6PFY8 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trim45Q6PFY8 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trim45Q6PFY8 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trim45Q6PFY8 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Trim45Q6PFY8 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.51■□□□□ 0.39
Trim45Q6PFY8 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trim45Q6PFY8 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim45Q6PFY8 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim45Q6PFY8 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.51■□□□□ 0.39
Trim45Q6PFY8 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim45Q6PFY8 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim45Q6PFY8 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim45Q6PFY8 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
Trim45Q6PFY8 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim45Q6PFY8 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.51■□□□□ 0.39
Trim45Q6PFY8 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trim45Q6PFY8 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim45Q6PFY8 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim45Q6PFY8 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim45Q6PFY8 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim45Q6PFY8 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim45Q6PFY8 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim45Q6PFY8 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim45Q6PFY8 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim45Q6PFY8 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Trim45Q6PFY8 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim45Q6PFY8 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.5■□□□□ 0.39
Trim45Q6PFY8 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Trim45Q6PFY8 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim45Q6PFY8 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Trim45Q6PFY8 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.5■□□□□ 0.39
Trim45Q6PFY8 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim45Q6PFY8 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Trim45Q6PFY8 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim45Q6PFY8 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trim45Q6PFY8 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim45Q6PFY8 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim45Q6PFY8 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.49■□□□□ 0.39
Trim45Q6PFY8 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Trim45Q6PFY8 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.49■□□□□ 0.39
Trim45Q6PFY8 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim45Q6PFY8 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Trim45Q6PFY8 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.49■□□□□ 0.39
Trim45Q6PFY8 Gm38205-201ENSMUST00000192243 258 ntBASIC17.49■□□□□ 0.39
Trim45Q6PFY8 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim45Q6PFY8 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Trim45Q6PFY8 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim45Q6PFY8 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim45Q6PFY8 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim45Q6PFY8 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim45Q6PFY8 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim45Q6PFY8 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.48■□□□□ 0.39
Trim45Q6PFY8 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trim45Q6PFY8 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim45Q6PFY8 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim45Q6PFY8 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC17.48■□□□□ 0.39
Trim45Q6PFY8 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Trim45Q6PFY8 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.48■□□□□ 0.39
Trim45Q6PFY8 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim45Q6PFY8 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim45Q6PFY8 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Trim45Q6PFY8 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim45Q6PFY8 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim45Q6PFY8 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trim45Q6PFY8 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim45Q6PFY8 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim45Q6PFY8 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim45Q6PFY8 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim45Q6PFY8 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim45Q6PFY8 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim45Q6PFY8 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
Trim45Q6PFY8 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trim45Q6PFY8 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC17.47■□□□□ 0.39
Trim45Q6PFY8 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim45Q6PFY8 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim45Q6PFY8 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Trim45Q6PFY8 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim45Q6PFY8 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC17.47■□□□□ 0.39
Trim45Q6PFY8 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.47■□□□□ 0.39
Trim45Q6PFY8 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
Trim45Q6PFY8 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim45Q6PFY8 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.46■□□□□ 0.39
Trim45Q6PFY8 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim45Q6PFY8 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.46■□□□□ 0.39
Trim45Q6PFY8 Gm13534-201ENSMUST00000121169 513 ntBASIC17.46■□□□□ 0.39
Trim45Q6PFY8 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Trim45Q6PFY8 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Trim45Q6PFY8 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim45Q6PFY8 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms