Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Casc4Q6P2L7 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.74■□□□□ 0.59
Casc4Q6P2L7 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.74■□□□□ 0.59
Casc4Q6P2L7 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Casc4Q6P2L7 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Casc4Q6P2L7 BC021767-201ENSMUST00000126387 1716 ntBASIC18.74■□□□□ 0.59
Casc4Q6P2L7 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Casc4Q6P2L7 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Casc4Q6P2L7 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Casc4Q6P2L7 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Casc4Q6P2L7 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Casc4Q6P2L7 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Casc4Q6P2L7 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.73■□□□□ 0.59
Casc4Q6P2L7 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Casc4Q6P2L7 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.73■□□□□ 0.59
Casc4Q6P2L7 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Casc4Q6P2L7 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Casc4Q6P2L7 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Casc4Q6P2L7 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Casc4Q6P2L7 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Casc4Q6P2L7 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.73■□□□□ 0.59
Casc4Q6P2L7 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Casc4Q6P2L7 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Casc4Q6P2L7 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Casc4Q6P2L7 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Casc4Q6P2L7 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Casc4Q6P2L7 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Casc4Q6P2L7 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Casc4Q6P2L7 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Casc4Q6P2L7 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Casc4Q6P2L7 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Casc4Q6P2L7 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Casc4Q6P2L7 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Casc4Q6P2L7 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Casc4Q6P2L7 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Casc4Q6P2L7 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Casc4Q6P2L7 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Casc4Q6P2L7 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Casc4Q6P2L7 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Casc4Q6P2L7 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Casc4Q6P2L7 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Casc4Q6P2L7 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.71■□□□□ 0.59
Casc4Q6P2L7 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Casc4Q6P2L7 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Casc4Q6P2L7 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Casc4Q6P2L7 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Casc4Q6P2L7 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Casc4Q6P2L7 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Casc4Q6P2L7 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
Casc4Q6P2L7 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Casc4Q6P2L7 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Casc4Q6P2L7 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Casc4Q6P2L7 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Casc4Q6P2L7 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Casc4Q6P2L7 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Casc4Q6P2L7 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Casc4Q6P2L7 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Casc4Q6P2L7 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Casc4Q6P2L7 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.7■□□□□ 0.58
Casc4Q6P2L7 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Casc4Q6P2L7 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.7■□□□□ 0.58
Casc4Q6P2L7 Gm37179-201ENSMUST00000194862 823 ntBASIC18.7■□□□□ 0.58
Casc4Q6P2L7 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.7■□□□□ 0.58
Casc4Q6P2L7 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.7■□□□□ 0.58
Casc4Q6P2L7 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.7■□□□□ 0.58
Casc4Q6P2L7 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Casc4Q6P2L7 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Casc4Q6P2L7 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.69■□□□□ 0.58
Casc4Q6P2L7 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Casc4Q6P2L7 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Casc4Q6P2L7 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Casc4Q6P2L7 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Casc4Q6P2L7 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Casc4Q6P2L7 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Casc4Q6P2L7 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Casc4Q6P2L7 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Casc4Q6P2L7 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Casc4Q6P2L7 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Casc4Q6P2L7 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Casc4Q6P2L7 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
Casc4Q6P2L7 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Casc4Q6P2L7 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Casc4Q6P2L7 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Casc4Q6P2L7 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Casc4Q6P2L7 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Casc4Q6P2L7 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
Casc4Q6P2L7 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.68■□□□□ 0.58
Casc4Q6P2L7 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Casc4Q6P2L7 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.68■□□□□ 0.58
Casc4Q6P2L7 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.68■□□□□ 0.58
Casc4Q6P2L7 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
Casc4Q6P2L7 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Casc4Q6P2L7 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Casc4Q6P2L7 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.68■□□□□ 0.58
Casc4Q6P2L7 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Casc4Q6P2L7 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Casc4Q6P2L7 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Casc4Q6P2L7 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Casc4Q6P2L7 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Casc4Q6P2L7 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms