Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ctr9Q62018 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ctr9Q62018 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Ctr9Q62018 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ctr9Q62018 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ctr9Q62018 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
Ctr9Q62018 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Ctr9Q62018 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ctr9Q62018 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ctr9Q62018 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ctr9Q62018 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ctr9Q62018 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ctr9Q62018 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ctr9Q62018 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC21.82■■□□□ 1.08
Ctr9Q62018 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ctr9Q62018 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ctr9Q62018 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Ctr9Q62018 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC21.81■■□□□ 1.08
Ctr9Q62018 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ctr9Q62018 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Ctr9Q62018 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ctr9Q62018 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Ctr9Q62018 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC21.81■■□□□ 1.08
Ctr9Q62018 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ctr9Q62018 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ctr9Q62018 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ctr9Q62018 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Ctr9Q62018 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Ctr9Q62018 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ctr9Q62018 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Ctr9Q62018 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Ctr9Q62018 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ctr9Q62018 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ctr9Q62018 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Ctr9Q62018 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Ctr9Q62018 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Ctr9Q62018 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ctr9Q62018 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ctr9Q62018 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ctr9Q62018 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ctr9Q62018 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Ctr9Q62018 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ctr9Q62018 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ctr9Q62018 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ctr9Q62018 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ctr9Q62018 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Ctr9Q62018 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC21.79■■□□□ 1.08
Ctr9Q62018 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Ctr9Q62018 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Ctr9Q62018 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
Ctr9Q62018 Gm8309-201ENSMUST00000206627 1448 ntBASIC21.79■■□□□ 1.08
Ctr9Q62018 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ctr9Q62018 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ctr9Q62018 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ctr9Q62018 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Ctr9Q62018 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Ctr9Q62018 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Ctr9Q62018 Gm37856-201ENSMUST00000191634 999 ntBASIC21.78■■□□□ 1.08
Ctr9Q62018 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
Ctr9Q62018 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Ctr9Q62018 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Ctr9Q62018 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Ctr9Q62018 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ctr9Q62018 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC21.78■■□□□ 1.08
Ctr9Q62018 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Ctr9Q62018 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ctr9Q62018 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Ctr9Q62018 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Ctr9Q62018 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Ctr9Q62018 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
Ctr9Q62018 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Ctr9Q62018 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC21.77■■□□□ 1.08
Ctr9Q62018 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ctr9Q62018 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC21.77■■□□□ 1.08
Ctr9Q62018 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ctr9Q62018 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ctr9Q62018 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ctr9Q62018 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC21.77■■□□□ 1.08
Ctr9Q62018 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC21.77■■□□□ 1.08
Ctr9Q62018 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ctr9Q62018 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Ctr9Q62018 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
Ctr9Q62018 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ctr9Q62018 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Ctr9Q62018 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Ctr9Q62018 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Ctr9Q62018 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC21.76■■□□□ 1.07
Ctr9Q62018 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ctr9Q62018 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC21.76■■□□□ 1.07
Ctr9Q62018 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ctr9Q62018 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ctr9Q62018 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ctr9Q62018 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ctr9Q62018 Gm44549-201ENSMUST00000208351 577 ntBASIC21.75■■□□□ 1.07
Ctr9Q62018 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Ctr9Q62018 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ctr9Q62018 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ctr9Q62018 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ctr9Q62018 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ctr9Q62018 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC21.74■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms