Protein–RNA interactions for Protein: Q5SZ99

Trim38, Tripartite motif-containing 38, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim38Q5SZ99 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trim38Q5SZ99 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.24■□□□□ 0.67
Trim38Q5SZ99 Gm42778-201ENSMUST00000199644 553 ntBASIC19.24■□□□□ 0.67
Trim38Q5SZ99 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim38Q5SZ99 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trim38Q5SZ99 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Trim38Q5SZ99 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim38Q5SZ99 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim38Q5SZ99 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Trim38Q5SZ99 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trim38Q5SZ99 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Trim38Q5SZ99 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim38Q5SZ99 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Trim38Q5SZ99 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.23■□□□□ 0.67
Trim38Q5SZ99 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.23■□□□□ 0.67
Trim38Q5SZ99 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.23■□□□□ 0.67
Trim38Q5SZ99 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim38Q5SZ99 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim38Q5SZ99 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim38Q5SZ99 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim38Q5SZ99 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim38Q5SZ99 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trim38Q5SZ99 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trim38Q5SZ99 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.22■□□□□ 0.67
Trim38Q5SZ99 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim38Q5SZ99 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.21■□□□□ 0.67
Trim38Q5SZ99 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC19.21■□□□□ 0.67
Trim38Q5SZ99 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim38Q5SZ99 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Trim38Q5SZ99 Gm45906-201ENSMUST00000208911 1430 ntBASIC19.21■□□□□ 0.67
Trim38Q5SZ99 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim38Q5SZ99 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim38Q5SZ99 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim38Q5SZ99 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Trim38Q5SZ99 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim38Q5SZ99 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim38Q5SZ99 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim38Q5SZ99 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC19.2■□□□□ 0.66
Trim38Q5SZ99 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.2■□□□□ 0.66
Trim38Q5SZ99 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim38Q5SZ99 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trim38Q5SZ99 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim38Q5SZ99 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19.2■□□□□ 0.66
Trim38Q5SZ99 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim38Q5SZ99 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim38Q5SZ99 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Trim38Q5SZ99 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Trim38Q5SZ99 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.19■□□□□ 0.66
Trim38Q5SZ99 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.19■□□□□ 0.66
Trim38Q5SZ99 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim38Q5SZ99 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim38Q5SZ99 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim38Q5SZ99 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim38Q5SZ99 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim38Q5SZ99 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim38Q5SZ99 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim38Q5SZ99 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim38Q5SZ99 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trim38Q5SZ99 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.18■□□□□ 0.66
Trim38Q5SZ99 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trim38Q5SZ99 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
Trim38Q5SZ99 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.18■□□□□ 0.66
Trim38Q5SZ99 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim38Q5SZ99 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim38Q5SZ99 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim38Q5SZ99 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim38Q5SZ99 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim38Q5SZ99 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Trim38Q5SZ99 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim38Q5SZ99 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Trim38Q5SZ99 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trim38Q5SZ99 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim38Q5SZ99 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Trim38Q5SZ99 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim38Q5SZ99 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim38Q5SZ99 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim38Q5SZ99 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Trim38Q5SZ99 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim38Q5SZ99 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim38Q5SZ99 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim38Q5SZ99 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim38Q5SZ99 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trim38Q5SZ99 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim38Q5SZ99 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim38Q5SZ99 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Trim38Q5SZ99 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trim38Q5SZ99 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Trim38Q5SZ99 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC19.16■□□□□ 0.66
Trim38Q5SZ99 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim38Q5SZ99 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trim38Q5SZ99 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim38Q5SZ99 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Trim38Q5SZ99 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim38Q5SZ99 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.15■□□□□ 0.66
Trim38Q5SZ99 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.15■□□□□ 0.66
Trim38Q5SZ99 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim38Q5SZ99 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Trim38Q5SZ99 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim38Q5SZ99 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim38Q5SZ99 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms