Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
Vps13aQ5H8C4 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC18.56■□□□□ 0.56
Vps13aQ5H8C4 Mtag2-201ENSMUST00000058665 714 ntBASIC18.56■□□□□ 0.56
Vps13aQ5H8C4 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Vps13aQ5H8C4 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Vps13aQ5H8C4 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.55■□□□□ 0.56
Vps13aQ5H8C4 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Vps13aQ5H8C4 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Vps13aQ5H8C4 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Vps13aQ5H8C4 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Vps13aQ5H8C4 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Vps13aQ5H8C4 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Vps13aQ5H8C4 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Vps13aQ5H8C4 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Vps13aQ5H8C4 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Vps13aQ5H8C4 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Vps13aQ5H8C4 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Vps13aQ5H8C4 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC18.55■□□□□ 0.56
Vps13aQ5H8C4 Umpk-ps-201ENSMUST00000211897 827 ntBASIC18.55■□□□□ 0.56
Vps13aQ5H8C4 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Vps13aQ5H8C4 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Vps13aQ5H8C4 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vps13aQ5H8C4 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.54■□□□□ 0.56
Vps13aQ5H8C4 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Vps13aQ5H8C4 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vps13aQ5H8C4 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.54■□□□□ 0.56
Vps13aQ5H8C4 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Vps13aQ5H8C4 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vps13aQ5H8C4 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Vps13aQ5H8C4 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vps13aQ5H8C4 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vps13aQ5H8C4 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vps13aQ5H8C4 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vps13aQ5H8C4 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
Vps13aQ5H8C4 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Vps13aQ5H8C4 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC18.53■□□□□ 0.56
Vps13aQ5H8C4 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.53■□□□□ 0.56
Vps13aQ5H8C4 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Vps13aQ5H8C4 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Vps13aQ5H8C4 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Vps13aQ5H8C4 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Vps13aQ5H8C4 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Vps13aQ5H8C4 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Vps13aQ5H8C4 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Vps13aQ5H8C4 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
Vps13aQ5H8C4 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Vps13aQ5H8C4 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Vps13aQ5H8C4 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Vps13aQ5H8C4 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Vps13aQ5H8C4 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Vps13aQ5H8C4 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Vps13aQ5H8C4 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vps13aQ5H8C4 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Vps13aQ5H8C4 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vps13aQ5H8C4 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.51■□□□□ 0.55
Vps13aQ5H8C4 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Vps13aQ5H8C4 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Vps13aQ5H8C4 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vps13aQ5H8C4 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Vps13aQ5H8C4 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vps13aQ5H8C4 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vps13aQ5H8C4 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vps13aQ5H8C4 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vps13aQ5H8C4 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vps13aQ5H8C4 Gm17661-201ENSMUST00000170317 270 ntBASIC18.5■□□□□ 0.55
Vps13aQ5H8C4 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Vps13aQ5H8C4 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vps13aQ5H8C4 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vps13aQ5H8C4 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vps13aQ5H8C4 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Vps13aQ5H8C4 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Vps13aQ5H8C4 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vps13aQ5H8C4 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Vps13aQ5H8C4 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.49■□□□□ 0.55
Vps13aQ5H8C4 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC18.49■□□□□ 0.55
Vps13aQ5H8C4 Gm18025-201ENSMUST00000221733 862 ntBASIC18.49■□□□□ 0.55
Vps13aQ5H8C4 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
Vps13aQ5H8C4 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Vps13aQ5H8C4 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Vps13aQ5H8C4 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Vps13aQ5H8C4 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC18.48■□□□□ 0.55
Vps13aQ5H8C4 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Vps13aQ5H8C4 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Vps13aQ5H8C4 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Vps13aQ5H8C4 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Vps13aQ5H8C4 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.48■□□□□ 0.55
Vps13aQ5H8C4 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Vps13aQ5H8C4 Gm43183-201ENSMUST00000200632 547 ntBASIC18.48■□□□□ 0.55
Vps13aQ5H8C4 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Vps13aQ5H8C4 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Vps13aQ5H8C4 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Vps13aQ5H8C4 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Vps13aQ5H8C4 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Vps13aQ5H8C4 Gm6277-202ENSMUST00000224036 2779 ntBASIC18.47■□□□□ 0.55
Vps13aQ5H8C4 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Vps13aQ5H8C4 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Vps13aQ5H8C4 Gm11927-201ENSMUST00000118472 759 ntBASIC18.47■□□□□ 0.55
Vps13aQ5H8C4 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.46■□□□□ 0.55
Vps13aQ5H8C4 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Vps13aQ5H8C4 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.46■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms