Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hspg2Q05793 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hspg2Q05793 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC13.82□□□□□ -0.2
Hspg2Q05793 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Hspg2Q05793 Gm9103-201ENSMUST00000119371 405 ntBASIC13.82□□□□□ -0.2
Hspg2Q05793 Gm45640-201ENSMUST00000210665 1896 ntBASIC13.82□□□□□ -0.2
Hspg2Q05793 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hspg2Q05793 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Hspg2Q05793 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC13.82□□□□□ -0.2
Hspg2Q05793 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hspg2Q05793 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Hspg2Q05793 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hspg2Q05793 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hspg2Q05793 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hspg2Q05793 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Hspg2Q05793 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hspg2Q05793 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hspg2Q05793 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Hspg2Q05793 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hspg2Q05793 Arhgef4-208ENSMUST00000211073 171 ntBASIC13.81□□□□□ -0.2
Hspg2Q05793 AC133598.3-202ENSMUST00000224219 531 ntBASIC13.81□□□□□ -0.2
Hspg2Q05793 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Hspg2Q05793 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hspg2Q05793 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hspg2Q05793 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Hspg2Q05793 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Hspg2Q05793 Gm6345-202ENSMUST00000180900 204 ntBASIC13.81□□□□□ -0.2
Hspg2Q05793 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hspg2Q05793 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Hspg2Q05793 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hspg2Q05793 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hspg2Q05793 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Hspg2Q05793 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hspg2Q05793 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Hspg2Q05793 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hspg2Q05793 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hspg2Q05793 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
Hspg2Q05793 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hspg2Q05793 Otx2os1-204ENSMUST00000227221 751 ntBASIC13.8□□□□□ -0.2
Hspg2Q05793 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Hspg2Q05793 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hspg2Q05793 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hspg2Q05793 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hspg2Q05793 Golph3-202ENSMUST00000226517 2359 ntBASIC13.8□□□□□ -0.2
Hspg2Q05793 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC13.8□□□□□ -0.2
Hspg2Q05793 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hspg2Q05793 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Hspg2Q05793 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Hspg2Q05793 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hspg2Q05793 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Hspg2Q05793 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC13.79□□□□□ -0.2
Hspg2Q05793 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Hspg2Q05793 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Hspg2Q05793 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Hspg2Q05793 Gm23634-201ENSMUST00000175071 91 ntBASIC13.79□□□□□ -0.2
Hspg2Q05793 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC13.79□□□□□ -0.2
Hspg2Q05793 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Hspg2Q05793 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Hspg2Q05793 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hspg2Q05793 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Hspg2Q05793 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
Hspg2Q05793 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Hspg2Q05793 Gm33142-201ENSMUST00000193913 867 ntBASIC13.78□□□□□ -0.2
Hspg2Q05793 AC159205.6-201ENSMUST00000224935 887 ntBASIC13.78□□□□□ -0.2
Hspg2Q05793 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hspg2Q05793 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Hspg2Q05793 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Hspg2Q05793 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hspg2Q05793 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hspg2Q05793 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hspg2Q05793 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hspg2Q05793 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hspg2Q05793 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hspg2Q05793 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hspg2Q05793 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Hspg2Q05793 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Hspg2Q05793 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Hspg2Q05793 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Hspg2Q05793 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC13.77□□□□□ -0.2
Hspg2Q05793 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Hspg2Q05793 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Hspg2Q05793 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hspg2Q05793 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Hspg2Q05793 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Hspg2Q05793 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hspg2Q05793 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hspg2Q05793 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hspg2Q05793 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC13.76□□□□□ -0.21
Hspg2Q05793 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hspg2Q05793 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC13.76□□□□□ -0.21
Hspg2Q05793 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Hspg2Q05793 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hspg2Q05793 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hspg2Q05793 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hspg2Q05793 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hspg2Q05793 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
Hspg2Q05793 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hspg2Q05793 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hspg2Q05793 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC13.76□□□□□ -0.21
Hspg2Q05793 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms