Protein–RNA interactions for Protein: P97471

Smad4, Mothers against decapentaplegic homolog 4, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad4P97471 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Smad4P97471 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC18.67■□□□□ 0.58
Smad4P97471 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Smad4P97471 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Smad4P97471 Gm27463-201ENSMUST00000183569 57 ntBASIC18.67■□□□□ 0.58
Smad4P97471 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC18.67■□□□□ 0.58
Smad4P97471 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smad4P97471 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Smad4P97471 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Smad4P97471 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smad4P97471 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Smad4P97471 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smad4P97471 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smad4P97471 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smad4P97471 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smad4P97471 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Smad4P97471 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Smad4P97471 AC130713.1-201ENSMUST00000228853 1096 ntBASIC18.66■□□□□ 0.58
Smad4P97471 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smad4P97471 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Smad4P97471 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Smad4P97471 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smad4P97471 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smad4P97471 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smad4P97471 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smad4P97471 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Smad4P97471 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Smad4P97471 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC18.65■□□□□ 0.58
Smad4P97471 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.65■□□□□ 0.58
Smad4P97471 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC18.65■□□□□ 0.58
Smad4P97471 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smad4P97471 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Smad4P97471 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smad4P97471 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smad4P97471 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smad4P97471 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smad4P97471 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smad4P97471 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smad4P97471 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Smad4P97471 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Smad4P97471 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Smad4P97471 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Smad4P97471 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Smad4P97471 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Smad4P97471 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smad4P97471 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.64■□□□□ 0.57
Smad4P97471 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.64■□□□□ 0.57
Smad4P97471 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Smad4P97471 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC18.64■□□□□ 0.57
Smad4P97471 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smad4P97471 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC18.64■□□□□ 0.57
Smad4P97471 Mir5130-201ENSMUST00000175160 84 ntBASIC18.64■□□□□ 0.57
Smad4P97471 Mir6349-201ENSMUST00000184059 97 ntBASIC18.64■□□□□ 0.57
Smad4P97471 Gm17971-201ENSMUST00000190239 806 ntBASIC18.64■□□□□ 0.57
Smad4P97471 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smad4P97471 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Smad4P97471 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smad4P97471 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Smad4P97471 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Smad4P97471 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Smad4P97471 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Smad4P97471 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Smad4P97471 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC18.63■□□□□ 0.57
Smad4P97471 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC18.63■□□□□ 0.57
Smad4P97471 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC18.63■□□□□ 0.57
Smad4P97471 Gm38285-201ENSMUST00000192928 922 ntBASIC18.63■□□□□ 0.57
Smad4P97471 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Smad4P97471 AC134329.2-201ENSMUST00000217897 428 ntBASIC18.63■□□□□ 0.57
Smad4P97471 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smad4P97471 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smad4P97471 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Smad4P97471 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smad4P97471 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Smad4P97471 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.63■□□□□ 0.57
Smad4P97471 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smad4P97471 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Smad4P97471 Gm32051-202ENSMUST00000197905 2385 ntBASIC18.63■□□□□ 0.57
Smad4P97471 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smad4P97471 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smad4P97471 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
Smad4P97471 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smad4P97471 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC18.62■□□□□ 0.57
Smad4P97471 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Smad4P97471 Gm7284-201ENSMUST00000131667 944 ntBASIC18.62■□□□□ 0.57
Smad4P97471 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smad4P97471 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smad4P97471 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smad4P97471 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Smad4P97471 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smad4P97471 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smad4P97471 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smad4P97471 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Smad4P97471 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smad4P97471 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.61■□□□□ 0.57
Smad4P97471 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smad4P97471 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.61■□□□□ 0.57
Smad4P97471 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC18.61■□□□□ 0.57
Smad4P97471 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smad4P97471 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Smad4P97471 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms