Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
PrkdcP97313 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
PrkdcP97313 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
PrkdcP97313 Gm4217-201ENSMUST00000182243 1002 ntBASIC12.86□□□□□ -0.35
PrkdcP97313 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC12.86□□□□□ -0.35
PrkdcP97313 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
PrkdcP97313 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
PrkdcP97313 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
PrkdcP97313 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
PrkdcP97313 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
PrkdcP97313 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
PrkdcP97313 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
PrkdcP97313 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
PrkdcP97313 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
PrkdcP97313 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC12.85□□□□□ -0.35
PrkdcP97313 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC12.85□□□□□ -0.35
PrkdcP97313 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC12.85□□□□□ -0.35
PrkdcP97313 Gm43514-201ENSMUST00000198852 424 ntBASIC12.85□□□□□ -0.35
PrkdcP97313 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
PrkdcP97313 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
PrkdcP97313 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
PrkdcP97313 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
PrkdcP97313 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
PrkdcP97313 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
PrkdcP97313 Spr-ps1-201ENSMUST00000089584 605 ntBASIC12.84□□□□□ -0.35
PrkdcP97313 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC12.84□□□□□ -0.35
PrkdcP97313 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
PrkdcP97313 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
PrkdcP97313 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
PrkdcP97313 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
PrkdcP97313 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
PrkdcP97313 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
PrkdcP97313 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC12.84□□□□□ -0.35
PrkdcP97313 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC12.84□□□□□ -0.35
PrkdcP97313 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
PrkdcP97313 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
PrkdcP97313 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
PrkdcP97313 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
PrkdcP97313 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
PrkdcP97313 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC12.83□□□□□ -0.36
PrkdcP97313 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
PrkdcP97313 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
PrkdcP97313 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
PrkdcP97313 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
PrkdcP97313 AC160393.1-201ENSMUST00000218378 1279 ntBASIC12.83□□□□□ -0.36
PrkdcP97313 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
PrkdcP97313 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
PrkdcP97313 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
PrkdcP97313 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
PrkdcP97313 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
PrkdcP97313 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
PrkdcP97313 Gm27704-201ENSMUST00000185094 107 ntBASIC12.83□□□□□ -0.36
PrkdcP97313 Gm5587-201ENSMUST00000206270 674 ntBASIC12.83□□□□□ -0.36
PrkdcP97313 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
PrkdcP97313 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
PrkdcP97313 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
PrkdcP97313 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
PrkdcP97313 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
PrkdcP97313 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
PrkdcP97313 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC12.82□□□□□ -0.36
PrkdcP97313 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
PrkdcP97313 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC12.82□□□□□ -0.36
PrkdcP97313 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
PrkdcP97313 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
PrkdcP97313 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
PrkdcP97313 Mzt1-203ENSMUST00000227948 952 ntBASIC12.82□□□□□ -0.36
PrkdcP97313 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC12.82□□□□□ -0.36
PrkdcP97313 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC12.82□□□□□ -0.36
PrkdcP97313 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
PrkdcP97313 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC12.82□□□□□ -0.36
PrkdcP97313 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
PrkdcP97313 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
PrkdcP97313 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
PrkdcP97313 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
PrkdcP97313 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
PrkdcP97313 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC12.82□□□□□ -0.36
PrkdcP97313 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC12.81□□□□□ -0.36
PrkdcP97313 Gm34391-201ENSMUST00000203706 907 ntBASIC12.81□□□□□ -0.36
PrkdcP97313 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC12.81□□□□□ -0.36
PrkdcP97313 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PrkdcP97313 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PrkdcP97313 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PrkdcP97313 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PrkdcP97313 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
PrkdcP97313 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
PrkdcP97313 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC12.81□□□□□ -0.36
PrkdcP97313 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
PrkdcP97313 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PrkdcP97313 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
PrkdcP97313 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC12.81□□□□□ -0.36
PrkdcP97313 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC12.81□□□□□ -0.36
PrkdcP97313 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PrkdcP97313 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
PrkdcP97313 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
PrkdcP97313 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC12.81□□□□□ -0.36
PrkdcP97313 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PrkdcP97313 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PrkdcP97313 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PrkdcP97313 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PrkdcP97313 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms