Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CiitaP79621 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CiitaP79621 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CiitaP79621 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
CiitaP79621 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CiitaP79621 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CiitaP79621 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC20.12■□□□□ 0.81
CiitaP79621 Trmt13-210ENSMUST00000198454 880 ntBASIC20.12■□□□□ 0.81
CiitaP79621 AC140264.2-202ENSMUST00000218746 817 ntBASIC20.12■□□□□ 0.81
CiitaP79621 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CiitaP79621 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CiitaP79621 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CiitaP79621 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
CiitaP79621 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CiitaP79621 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC20.12■□□□□ 0.81
CiitaP79621 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CiitaP79621 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
CiitaP79621 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CiitaP79621 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CiitaP79621 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CiitaP79621 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CiitaP79621 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CiitaP79621 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
CiitaP79621 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CiitaP79621 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CiitaP79621 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CiitaP79621 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CiitaP79621 Gm27275-201ENSMUST00000184318 272 ntBASIC20.11■□□□□ 0.81
CiitaP79621 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
CiitaP79621 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CiitaP79621 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CiitaP79621 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CiitaP79621 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
CiitaP79621 Gm15853-202ENSMUST00000195518 2041 ntBASIC20.1■□□□□ 0.81
CiitaP79621 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CiitaP79621 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CiitaP79621 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CiitaP79621 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC20.1■□□□□ 0.81
CiitaP79621 Gm44878-201ENSMUST00000205812 1295 ntBASIC20.1■□□□□ 0.81
CiitaP79621 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
CiitaP79621 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
CiitaP79621 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CiitaP79621 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CiitaP79621 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CiitaP79621 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CiitaP79621 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CiitaP79621 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
CiitaP79621 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC20.09■□□□□ 0.81
CiitaP79621 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CiitaP79621 Gm8520-201ENSMUST00000186517 868 ntBASIC20.09■□□□□ 0.81
CiitaP79621 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC20.09■□□□□ 0.81
CiitaP79621 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CiitaP79621 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC20.09■□□□□ 0.81
CiitaP79621 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CiitaP79621 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CiitaP79621 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CiitaP79621 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CiitaP79621 Gm22325-201ENSMUST00000158904 308 ntBASIC20.08■□□□□ 0.81
CiitaP79621 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC20.08■□□□□ 0.81
CiitaP79621 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CiitaP79621 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CiitaP79621 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CiitaP79621 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CiitaP79621 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
CiitaP79621 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
CiitaP79621 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC20.07■□□□□ 0.8
CiitaP79621 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CiitaP79621 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC20.07■□□□□ 0.8
CiitaP79621 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CiitaP79621 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CiitaP79621 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CiitaP79621 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CiitaP79621 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CiitaP79621 BC021767-201ENSMUST00000126387 1716 ntBASIC20.07■□□□□ 0.8
CiitaP79621 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CiitaP79621 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CiitaP79621 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC20.06■□□□□ 0.8
CiitaP79621 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
CiitaP79621 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CiitaP79621 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC20.06■□□□□ 0.8
CiitaP79621 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
CiitaP79621 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CiitaP79621 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CiitaP79621 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CiitaP79621 Gm11249-201ENSMUST00000117071 859 ntBASIC20.05■□□□□ 0.8
CiitaP79621 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC20.05■□□□□ 0.8
CiitaP79621 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC20.05■□□□□ 0.8
CiitaP79621 Gm22240-201ENSMUST00000175225 82 ntBASIC20.05■□□□□ 0.8
CiitaP79621 Gm37805-201ENSMUST00000192612 1094 ntBASIC20.05■□□□□ 0.8
CiitaP79621 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
CiitaP79621 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CiitaP79621 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
CiitaP79621 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CiitaP79621 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CiitaP79621 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CiitaP79621 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CiitaP79621 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CiitaP79621 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CiitaP79621 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CiitaP79621 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms