Protein–RNA interactions for Protein: P57080

Usp25, Ubiquitin carboxyl-terminal hydrolase 25, mousemouse

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp25P57080 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Usp25P57080 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Usp25P57080 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.93■□□□□ 0.94
Usp25P57080 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.93■□□□□ 0.94
Usp25P57080 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Usp25P57080 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Usp25P57080 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Usp25P57080 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usp25P57080 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usp25P57080 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Usp25P57080 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC20.92■□□□□ 0.94
Usp25P57080 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC20.92■□□□□ 0.94
Usp25P57080 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usp25P57080 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usp25P57080 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usp25P57080 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Usp25P57080 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usp25P57080 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Usp25P57080 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Usp25P57080 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usp25P57080 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usp25P57080 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
Usp25P57080 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usp25P57080 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usp25P57080 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Usp25P57080 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usp25P57080 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usp25P57080 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Usp25P57080 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usp25P57080 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Usp25P57080 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Usp25P57080 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Usp25P57080 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Usp25P57080 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Usp25P57080 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Usp25P57080 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Usp25P57080 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Usp25P57080 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Usp25P57080 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Usp25P57080 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Usp25P57080 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
Usp25P57080 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
Usp25P57080 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.94
Usp25P57080 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Usp25P57080 Gm7860-201ENSMUST00000121190 879 ntBASIC20.89■□□□□ 0.93
Usp25P57080 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
Usp25P57080 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Usp25P57080 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Usp25P57080 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC20.89■□□□□ 0.93
Usp25P57080 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Usp25P57080 Fst-202ENSMUST00000223640 2612 ntBASIC20.89■□□□□ 0.93
Usp25P57080 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
Usp25P57080 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usp25P57080 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usp25P57080 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usp25P57080 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.88■□□□□ 0.93
Usp25P57080 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usp25P57080 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usp25P57080 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Usp25P57080 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usp25P57080 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usp25P57080 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usp25P57080 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Usp25P57080 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Usp25P57080 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usp25P57080 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usp25P57080 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC20.88■□□□□ 0.93
Usp25P57080 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usp25P57080 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Usp25P57080 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Usp25P57080 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Usp25P57080 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.87■□□□□ 0.93
Usp25P57080 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Usp25P57080 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Usp25P57080 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Usp25P57080 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Usp25P57080 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Usp25P57080 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Usp25P57080 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp25P57080 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp25P57080 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp25P57080 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp25P57080 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp25P57080 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp25P57080 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC20.86■□□□□ 0.93
Usp25P57080 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Usp25P57080 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Usp25P57080 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Usp25P57080 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp25P57080 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp25P57080 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp25P57080 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp25P57080 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp25P57080 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp25P57080 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Usp25P57080 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Usp25P57080 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Usp25P57080 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Usp25P57080 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Usp25P57080 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms