Protein–RNA interactions for Protein: P51944

Ccnf, Cyclin-F, mousemouse

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnfP51944 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC17.63■□□□□ 0.41
CcnfP51944 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC17.63■□□□□ 0.41
CcnfP51944 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
CcnfP51944 Gm9207-201ENSMUST00000198773 1115 ntBASIC17.63■□□□□ 0.41
CcnfP51944 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.63■□□□□ 0.41
CcnfP51944 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CcnfP51944 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CcnfP51944 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.63■□□□□ 0.41
CcnfP51944 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CcnfP51944 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CcnfP51944 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
CcnfP51944 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CcnfP51944 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CcnfP51944 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CcnfP51944 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CcnfP51944 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CcnfP51944 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CcnfP51944 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CcnfP51944 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CcnfP51944 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CcnfP51944 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CcnfP51944 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC17.62■□□□□ 0.41
CcnfP51944 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CcnfP51944 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CcnfP51944 Gm5576-201ENSMUST00000075809 1236 ntBASIC17.62■□□□□ 0.41
CcnfP51944 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.62■□□□□ 0.41
CcnfP51944 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CcnfP51944 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CcnfP51944 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CcnfP51944 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CcnfP51944 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CcnfP51944 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CcnfP51944 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CcnfP51944 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.61■□□□□ 0.41
CcnfP51944 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CcnfP51944 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC17.61■□□□□ 0.41
CcnfP51944 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CcnfP51944 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CcnfP51944 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CcnfP51944 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CcnfP51944 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CcnfP51944 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CcnfP51944 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
CcnfP51944 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CcnfP51944 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CcnfP51944 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CcnfP51944 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CcnfP51944 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CcnfP51944 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CcnfP51944 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CcnfP51944 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CcnfP51944 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
CcnfP51944 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CcnfP51944 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CcnfP51944 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CcnfP51944 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.6■□□□□ 0.41
CcnfP51944 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CcnfP51944 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CcnfP51944 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
CcnfP51944 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CcnfP51944 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CcnfP51944 Gm12922-201ENSMUST00000120626 809 ntBASIC17.59■□□□□ 0.41
CcnfP51944 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CcnfP51944 Gm8969-201ENSMUST00000199694 526 ntBASIC17.59■□□□□ 0.41
CcnfP51944 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CcnfP51944 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CcnfP51944 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CcnfP51944 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CcnfP51944 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.59■□□□□ 0.41
CcnfP51944 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CcnfP51944 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CcnfP51944 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CcnfP51944 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CcnfP51944 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CcnfP51944 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
CcnfP51944 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
CcnfP51944 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CcnfP51944 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.58■□□□□ 0.41
CcnfP51944 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CcnfP51944 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CcnfP51944 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CcnfP51944 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CcnfP51944 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
CcnfP51944 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
CcnfP51944 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
CcnfP51944 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CcnfP51944 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CcnfP51944 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CcnfP51944 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CcnfP51944 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.57■□□□□ 0.4
CcnfP51944 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CcnfP51944 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CcnfP51944 Gm7160-202ENSMUST00000188519 1027 ntBASIC17.57■□□□□ 0.4
CcnfP51944 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.57■□□□□ 0.4
CcnfP51944 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CcnfP51944 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.57■□□□□ 0.4
CcnfP51944 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CcnfP51944 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CcnfP51944 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CcnfP51944 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms