Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HttP42859 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HttP42859 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HttP42859 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HttP42859 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HttP42859 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HttP42859 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC20.05■□□□□ 0.8
HttP42859 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
HttP42859 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
HttP42859 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
HttP42859 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
HttP42859 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HttP42859 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.04■□□□□ 0.8
HttP42859 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HttP42859 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
HttP42859 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HttP42859 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HttP42859 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HttP42859 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HttP42859 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
HttP42859 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HttP42859 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HttP42859 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HttP42859 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HttP42859 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HttP42859 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
HttP42859 Gm10138-203ENSMUST00000206952 366 ntBASIC20.02■□□□□ 0.8
HttP42859 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HttP42859 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC20.02■□□□□ 0.8
HttP42859 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HttP42859 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC20.02■□□□□ 0.8
HttP42859 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC20.02■□□□□ 0.8
HttP42859 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HttP42859 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
HttP42859 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HttP42859 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
HttP42859 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
HttP42859 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
HttP42859 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.79
HttP42859 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
HttP42859 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
HttP42859 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.79
HttP42859 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
HttP42859 Gm19094-201ENSMUST00000209791 1246 ntBASIC20.01■□□□□ 0.79
HttP42859 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HttP42859 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
HttP42859 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
HttP42859 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HttP42859 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HttP42859 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.01■□□□□ 0.79
HttP42859 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC20.01■□□□□ 0.79
HttP42859 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC20■□□□□ 0.79
HttP42859 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
HttP42859 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
HttP42859 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
HttP42859 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HttP42859 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HttP42859 Gm12382-201ENSMUST00000122005 922 ntBASIC20■□□□□ 0.79
HttP42859 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC20■□□□□ 0.79
HttP42859 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20■□□□□ 0.79
HttP42859 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC20■□□□□ 0.79
HttP42859 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC20■□□□□ 0.79
HttP42859 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HttP42859 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC20■□□□□ 0.79
HttP42859 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
HttP42859 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HttP42859 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC19.99■□□□□ 0.79
HttP42859 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC19.99■□□□□ 0.79
HttP42859 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HttP42859 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC19.99■□□□□ 0.79
HttP42859 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HttP42859 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HttP42859 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HttP42859 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
HttP42859 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.98■□□□□ 0.79
HttP42859 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HttP42859 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC19.98■□□□□ 0.79
HttP42859 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HttP42859 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HttP42859 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
HttP42859 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HttP42859 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HttP42859 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HttP42859 AC134329.2-201ENSMUST00000217897 428 ntBASIC19.98■□□□□ 0.79
HttP42859 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
HttP42859 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
HttP42859 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HttP42859 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
HttP42859 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
HttP42859 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
HttP42859 AW822252-206ENSMUST00000208904 237 ntBASIC19.97■□□□□ 0.79
HttP42859 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HttP42859 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
HttP42859 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC19.97■□□□□ 0.79
HttP42859 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HttP42859 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
HttP42859 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
HttP42859 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HttP42859 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
HttP42859 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC19.96■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms