Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cxcl12P40224 Gm37292-201ENSMUST00000192062 758 ntBASIC19.21■□□□□ 0.67
Cxcl12P40224 Gm33142-201ENSMUST00000193913 867 ntBASIC19.21■□□□□ 0.67
Cxcl12P40224 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cxcl12P40224 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Cxcl12P40224 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cxcl12P40224 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cxcl12P40224 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cxcl12P40224 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cxcl12P40224 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cxcl12P40224 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cxcl12P40224 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cxcl12P40224 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.2■□□□□ 0.66
Cxcl12P40224 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Cxcl12P40224 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cxcl12P40224 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cxcl12P40224 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cxcl12P40224 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cxcl12P40224 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cxcl12P40224 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.2■□□□□ 0.66
Cxcl12P40224 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC19.2■□□□□ 0.66
Cxcl12P40224 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cxcl12P40224 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cxcl12P40224 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cxcl12P40224 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cxcl12P40224 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cxcl12P40224 Gm12382-201ENSMUST00000122005 922 ntBASIC19.19■□□□□ 0.66
Cxcl12P40224 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
Cxcl12P40224 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cxcl12P40224 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cxcl12P40224 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cxcl12P40224 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cxcl12P40224 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cxcl12P40224 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cxcl12P40224 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Cxcl12P40224 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cxcl12P40224 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cxcl12P40224 Gm6345-202ENSMUST00000180900 204 ntBASIC19.18■□□□□ 0.66
Cxcl12P40224 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC19.18■□□□□ 0.66
Cxcl12P40224 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Cxcl12P40224 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cxcl12P40224 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cxcl12P40224 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cxcl12P40224 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cxcl12P40224 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC19.17■□□□□ 0.66
Cxcl12P40224 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cxcl12P40224 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cxcl12P40224 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cxcl12P40224 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cxcl12P40224 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cxcl12P40224 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cxcl12P40224 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC19.17■□□□□ 0.66
Cxcl12P40224 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cxcl12P40224 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cxcl12P40224 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cxcl12P40224 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cxcl12P40224 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.17■□□□□ 0.66
Cxcl12P40224 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cxcl12P40224 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
Cxcl12P40224 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cxcl12P40224 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cxcl12P40224 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cxcl12P40224 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC19.16■□□□□ 0.66
Cxcl12P40224 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cxcl12P40224 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.16■□□□□ 0.66
Cxcl12P40224 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Cxcl12P40224 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cxcl12P40224 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cxcl12P40224 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cxcl12P40224 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cxcl12P40224 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cxcl12P40224 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cxcl12P40224 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cxcl12P40224 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Cxcl12P40224 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Cxcl12P40224 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cxcl12P40224 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cxcl12P40224 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cxcl12P40224 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Cxcl12P40224 Gm9103-201ENSMUST00000119371 405 ntBASIC19.15■□□□□ 0.66
Cxcl12P40224 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Cxcl12P40224 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cxcl12P40224 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
Cxcl12P40224 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Cxcl12P40224 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Cxcl12P40224 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cxcl12P40224 Gm14859-201ENSMUST00000117752 357 ntBASIC19.14■□□□□ 0.65
Cxcl12P40224 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC19.14■□□□□ 0.65
Cxcl12P40224 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Cxcl12P40224 Gm18101-201ENSMUST00000215769 548 ntBASIC19.14■□□□□ 0.65
Cxcl12P40224 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cxcl12P40224 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cxcl12P40224 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Cxcl12P40224 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cxcl12P40224 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cxcl12P40224 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cxcl12P40224 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Cxcl12P40224 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Cxcl12P40224 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Cxcl12P40224 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms