Protein–RNA interactions for Protein: P35546

Ret, Proto-oncogene tyrosine-protein kinase receptor Ret, mousemouse

Predictions only

Length 1,115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RetP35546 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RetP35546 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RetP35546 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RetP35546 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
RetP35546 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.32■□□□□ 0.36
RetP35546 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.32■□□□□ 0.36
RetP35546 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.31■□□□□ 0.36
RetP35546 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
RetP35546 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.31■□□□□ 0.36
RetP35546 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RetP35546 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
RetP35546 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
RetP35546 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RetP35546 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RetP35546 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RetP35546 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
RetP35546 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RetP35546 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RetP35546 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RetP35546 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.31■□□□□ 0.36
RetP35546 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.3■□□□□ 0.36
RetP35546 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RetP35546 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RetP35546 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RetP35546 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RetP35546 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
RetP35546 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
RetP35546 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RetP35546 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.3■□□□□ 0.36
RetP35546 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RetP35546 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
RetP35546 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RetP35546 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RetP35546 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.29■□□□□ 0.36
RetP35546 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RetP35546 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
RetP35546 Gm13168-201ENSMUST00000121771 632 ntBASIC17.29■□□□□ 0.36
RetP35546 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RetP35546 Gm6365-201ENSMUST00000054711 744 ntBASIC17.29■□□□□ 0.36
RetP35546 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RetP35546 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RetP35546 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RetP35546 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RetP35546 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RetP35546 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RetP35546 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RetP35546 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RetP35546 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RetP35546 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RetP35546 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RetP35546 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RetP35546 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RetP35546 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RetP35546 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.28■□□□□ 0.36
RetP35546 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RetP35546 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.28■□□□□ 0.36
RetP35546 Gm22325-201ENSMUST00000158904 308 ntBASIC17.28■□□□□ 0.36
RetP35546 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RetP35546 Mir7071-201ENSMUST00000184847 69 ntBASIC17.28■□□□□ 0.36
RetP35546 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.28■□□□□ 0.36
RetP35546 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RetP35546 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
RetP35546 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RetP35546 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RetP35546 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RetP35546 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RetP35546 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RetP35546 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RetP35546 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RetP35546 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.27■□□□□ 0.36
RetP35546 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
RetP35546 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RetP35546 Gm13148-201ENSMUST00000118892 745 ntBASIC17.27■□□□□ 0.36
RetP35546 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.27■□□□□ 0.36
RetP35546 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RetP35546 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.27■□□□□ 0.36
RetP35546 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RetP35546 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.27■□□□□ 0.36
RetP35546 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RetP35546 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
RetP35546 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RetP35546 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
RetP35546 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.27■□□□□ 0.36
RetP35546 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
RetP35546 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RetP35546 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
RetP35546 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
RetP35546 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
RetP35546 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
RetP35546 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RetP35546 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RetP35546 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.26■□□□□ 0.35
RetP35546 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.26■□□□□ 0.35
RetP35546 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RetP35546 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RetP35546 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RetP35546 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
RetP35546 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
RetP35546 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RetP35546 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms