Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rb1P13405 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.83■□□□□ 0.6
Rb1P13405 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Rb1P13405 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rb1P13405 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
Rb1P13405 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
Rb1P13405 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rb1P13405 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rb1P13405 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rb1P13405 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Rb1P13405 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Rb1P13405 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Rb1P13405 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rb1P13405 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
Rb1P13405 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Rb1P13405 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rb1P13405 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rb1P13405 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rb1P13405 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rb1P13405 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rb1P13405 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC18.81■□□□□ 0.6
Rb1P13405 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.81■□□□□ 0.6
Rb1P13405 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rb1P13405 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC18.81■□□□□ 0.6
Rb1P13405 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Rb1P13405 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rb1P13405 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rb1P13405 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rb1P13405 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rb1P13405 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rb1P13405 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rb1P13405 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Rb1P13405 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Rb1P13405 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rb1P13405 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rb1P13405 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rb1P13405 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rb1P13405 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.8■□□□□ 0.6
Rb1P13405 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Rb1P13405 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Rb1P13405 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC18.8■□□□□ 0.6
Rb1P13405 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC18.8■□□□□ 0.6
Rb1P13405 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.8■□□□□ 0.6
Rb1P13405 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rb1P13405 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rb1P13405 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Rb1P13405 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rb1P13405 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Rb1P13405 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rb1P13405 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Rb1P13405 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Rb1P13405 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.79■□□□□ 0.6
Rb1P13405 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rb1P13405 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.79■□□□□ 0.6
Rb1P13405 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rb1P13405 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Rb1P13405 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rb1P13405 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rb1P13405 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rb1P13405 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rb1P13405 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rb1P13405 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Rb1P13405 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rb1P13405 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rb1P13405 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rb1P13405 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rb1P13405 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rb1P13405 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rb1P13405 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Rb1P13405 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC18.78■□□□□ 0.6
Rb1P13405 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rb1P13405 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.78■□□□□ 0.6
Rb1P13405 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rb1P13405 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rb1P13405 Gm10812-201ENSMUST00000099864 546 ntBASIC18.78■□□□□ 0.6
Rb1P13405 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rb1P13405 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rb1P13405 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rb1P13405 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Rb1P13405 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rb1P13405 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rb1P13405 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rb1P13405 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
Rb1P13405 AA386476-201ENSMUST00000098781 1665 ntBASIC18.77■□□□□ 0.6
Rb1P13405 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rb1P13405 Gm37856-201ENSMUST00000191634 999 ntBASIC18.77■□□□□ 0.6
Rb1P13405 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.77■□□□□ 0.6
Rb1P13405 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rb1P13405 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rb1P13405 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Rb1P13405 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Rb1P13405 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Rb1P13405 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rb1P13405 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rb1P13405 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rb1P13405 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rb1P13405 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Rb1P13405 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.76■□□□□ 0.59
Rb1P13405 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.76■□□□□ 0.59
Rb1P13405 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms