Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Best1O88870 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.87■□□□□ 0.45
Best1O88870 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Best1O88870 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Best1O88870 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Best1O88870 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Best1O88870 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.87■□□□□ 0.45
Best1O88870 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Best1O88870 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Best1O88870 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Best1O88870 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.87■□□□□ 0.45
Best1O88870 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
Best1O88870 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Best1O88870 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
Best1O88870 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Best1O88870 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Best1O88870 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Best1O88870 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Best1O88870 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Best1O88870 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Best1O88870 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.86■□□□□ 0.45
Best1O88870 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Best1O88870 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Best1O88870 BC021767-201ENSMUST00000126387 1716 ntBASIC17.86■□□□□ 0.45
Best1O88870 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Best1O88870 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Best1O88870 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.85■□□□□ 0.45
Best1O88870 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Best1O88870 Gm11249-201ENSMUST00000117071 859 ntBASIC17.85■□□□□ 0.45
Best1O88870 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
Best1O88870 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Best1O88870 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Best1O88870 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.85■□□□□ 0.45
Best1O88870 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Best1O88870 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Best1O88870 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Best1O88870 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.85■□□□□ 0.45
Best1O88870 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Best1O88870 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Best1O88870 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Best1O88870 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Best1O88870 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Best1O88870 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Best1O88870 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Best1O88870 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.84■□□□□ 0.45
Best1O88870 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.84■□□□□ 0.45
Best1O88870 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Best1O88870 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Best1O88870 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Best1O88870 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
Best1O88870 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Best1O88870 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.83■□□□□ 0.45
Best1O88870 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Best1O88870 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.83■□□□□ 0.45
Best1O88870 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.45
Best1O88870 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Best1O88870 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Best1O88870 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Best1O88870 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Best1O88870 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Best1O88870 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC17.83■□□□□ 0.44
Best1O88870 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Best1O88870 Gm5643-201ENSMUST00000117081 966 ntBASIC17.83■□□□□ 0.44
Best1O88870 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.83■□□□□ 0.44
Best1O88870 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Best1O88870 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Best1O88870 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Best1O88870 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.83■□□□□ 0.44
Best1O88870 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Best1O88870 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Best1O88870 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Best1O88870 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Best1O88870 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Best1O88870 Gm18666-201ENSMUST00000190039 958 ntBASIC17.82■□□□□ 0.44
Best1O88870 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Best1O88870 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Best1O88870 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Best1O88870 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Best1O88870 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Best1O88870 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Best1O88870 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Best1O88870 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Best1O88870 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Best1O88870 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Best1O88870 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Best1O88870 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Best1O88870 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Best1O88870 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Best1O88870 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Best1O88870 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Best1O88870 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Best1O88870 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.81■□□□□ 0.44
Best1O88870 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Best1O88870 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Best1O88870 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.81■□□□□ 0.44
Best1O88870 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Best1O88870 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Best1O88870 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Best1O88870 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Best1O88870 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms