Protein–RNA interactions for Protein: O88834

Shd, SH2 domain-containing adapter protein D, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShdO88834 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ShdO88834 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ShdO88834 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.97■□□□□ 0.63
ShdO88834 Gm7514-201ENSMUST00000209475 934 ntBASIC18.97■□□□□ 0.63
ShdO88834 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.97■□□□□ 0.63
ShdO88834 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ShdO88834 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
ShdO88834 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ShdO88834 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ShdO88834 Gm27405-201ENSMUST00000184201 112 ntBASIC18.96■□□□□ 0.63
ShdO88834 Gm7291-201ENSMUST00000199147 382 ntBASIC18.96■□□□□ 0.63
ShdO88834 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.96■□□□□ 0.63
ShdO88834 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ShdO88834 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
ShdO88834 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
ShdO88834 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ShdO88834 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ShdO88834 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
ShdO88834 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
ShdO88834 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
ShdO88834 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ShdO88834 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.95■□□□□ 0.62
ShdO88834 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ShdO88834 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ShdO88834 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ShdO88834 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ShdO88834 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ShdO88834 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ShdO88834 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ShdO88834 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.93■□□□□ 0.62
ShdO88834 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ShdO88834 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.93■□□□□ 0.62
ShdO88834 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ShdO88834 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ShdO88834 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.93■□□□□ 0.62
ShdO88834 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ShdO88834 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ShdO88834 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
ShdO88834 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ShdO88834 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ShdO88834 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ShdO88834 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ShdO88834 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
ShdO88834 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.92■□□□□ 0.62
ShdO88834 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ShdO88834 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
ShdO88834 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ShdO88834 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ShdO88834 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.91■□□□□ 0.62
ShdO88834 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
ShdO88834 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ShdO88834 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.91■□□□□ 0.62
ShdO88834 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
ShdO88834 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ShdO88834 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ShdO88834 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ShdO88834 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.9■□□□□ 0.62
ShdO88834 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.9■□□□□ 0.62
ShdO88834 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ShdO88834 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
ShdO88834 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
ShdO88834 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
ShdO88834 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ShdO88834 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.9■□□□□ 0.62
ShdO88834 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ShdO88834 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
ShdO88834 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ShdO88834 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ShdO88834 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
ShdO88834 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ShdO88834 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ShdO88834 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ShdO88834 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.89■□□□□ 0.61
ShdO88834 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ShdO88834 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ShdO88834 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ShdO88834 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.89■□□□□ 0.61
ShdO88834 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
ShdO88834 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
ShdO88834 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ShdO88834 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ShdO88834 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
ShdO88834 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.88■□□□□ 0.61
ShdO88834 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ShdO88834 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ShdO88834 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
ShdO88834 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ShdO88834 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
ShdO88834 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
ShdO88834 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ShdO88834 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ShdO88834 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ShdO88834 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ShdO88834 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.87■□□□□ 0.61
ShdO88834 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ShdO88834 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ShdO88834 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ShdO88834 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ShdO88834 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.87■□□□□ 0.61
ShdO88834 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms